Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	183.2 / NA	55	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (28/27);  total (28/27)

GCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTG  >  NC_002947/6013748‑6014023                                                                                                                                           |                                                                                                                                           gCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGc                                                                                                                                   <  8:28865/147‑1 (MQ=255) gCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCg                                                                                                                                 <  4:322124/149‑1 (MQ=255)               gCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACCCCCGCGCCCACAGGGGCAGCACACGTCACGAACGCTGT‑GCCGGAACGGTTGGGGCGGGCGTGCCCGCGAAAGGCCCCAACCCTTTTATCt                                                                                                                   >  8:95872/1‑149 (MQ=255)                 tGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACCCCCCCTACCACCCGTGCCGCACAGGTGTCGAAAGCTGT‑GCCGTAACTGTGGGGGCGGGCGGGCCCCCGAATGGCCGCAACCCGTTTTTCTgg                                                                                                                 >  1:333602/1‑149 (MQ=255)                      ggtggtGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTgcc                                                                                                            <  8:123876/149‑1 (MQ=255)                      ggtggtGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTgcc                                                                                                            <  6:423841/149‑1 (MQ=255)                                        aTCGAATAAACGCGACACCTGCTTCGCGGGCCCCCCCCCACCCACACGTGGCGCACAGGGCGGGGACGCGGTGGCCGTA‑CAGTGGGAGCGGGCGGGCCCGCGAATGGCCGCACCCCGTTTATATGGTTTGCCCCCGCCCCCCcaacaa                                                                                           >  8:113571/1‑148 (MQ=255)                                          cGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCt                                                                                                                   <  3:343664/122‑1 (MQ=255)                                                atcgctACACCTGCTTCGCGGGCAGGACCGCTCCCAGAGGTGCAGCACAGTTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTg                                                                                  <  6:91428/147‑1 (MQ=38)                                                 aCGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCATCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTgg                                                                                 <  3:149913/149‑1 (MQ=255)                                                 aCGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTgg                                                                                 <  5:110675/149‑1 (MQ=255)                                                       cacCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGt                                                                           <  1:313364/149‑1 (MQ=255)                                                           tGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttctt                                                                       >  3:323728/1‑149 (MQ=255)                                                                 gcgGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTaa                                                                 <  4:263325/149‑1 (MQ=255)                                                                 gcgGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGT‑GCTGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTaa                                                                 >  3:248045/1‑149 (MQ=18)                                                                   gggCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGc                                                               <  2:333602/149‑1 (MQ=255)                                                                     gCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGtt                                                                                                               >  8:308004/1‑99 (MQ=255)                                                                     gCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGtt                                                                                                               <  7:308004/99‑1 (MQ=255)                                                                     gCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGccc                                                             >  2:333211/1‑149 (MQ=255)                                                                         gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                         >  3:408273/1‑149 (MQ=255)                                                                          cccGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGT‑GCTGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGTCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCg                                                        >  6:101617/1‑149 (MQ=18)                                                                               tCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                   >  7:382729/1‑149 (MQ=255)                                                                                 ccACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCtt                                                                                                                         <  4:42019/77‑1 (MQ=255)                                                                                 ccACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCtt                                                                                                                         >  3:42019/1‑77 (MQ=255)                                                                                 ccACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCCGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                 >  2:82955/1‑149 (MQ=255)                                                                                 ccACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                 >  4:271040/1‑149 (MQ=255)                                                                                 ccACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                 >  3:213574/1‑149 (MQ=255)                                                                                   acaGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTaa                                                                 >  4:318211/1‑131 (MQ=255)                                                                                   acaGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTaa                                                                 <  3:318211/131‑1 (MQ=255)                                                                                   acaGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                         <  7:321840/139‑1 (MQ=255)                                                                                   acaGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                         >  8:321840/1‑139 (MQ=255)                                                                                   acaGGTACGGCACAGCGTTCGAGACCTGT‑GCTGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGACCCTGCGGCTGcccc                                                >  5:63070/1‑148 (MQ=21)                                                                                     aGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAAc                                             <  8:224243/149‑1 (MQ=255)                                                                                     aGGTGCAGCACAGGACTCGAACGCAGT‑GCCGTACCTGTGGGACCGGCCGAGCCCGCCAATGGCCGCAACCCTTTTATCTGGTTGCCGCCACCCCCCCCAACAACACGCCCTGGTAAAGTTCTTCTTTAACCCCCTCCGGCTGCCCCaa                                              >  2:226153/1‑148 (MQ=255)                                                                                        tGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGTCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                                >  5:352782/1‑143 (MQ=255)                                                                                        tGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGTCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                                <  6:352782/143‑1 (MQ=255)                                                                                           agcaCAGGTCTCTAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATc                                       <  3:374182/149‑1 (MQ=255)                                                                                             cacaGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCg                                     >  4:329410/1‑149 (MQ=255)                                                                                                  gTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGccc                                  >  8:208735/1‑147 (MQ=255)                                                                                                       gAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTgg                           >  8:24694/1‑149 (MQ=255)                                                                                                        aaCGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGc                          >  2:187670/1‑149 (MQ=255)                                                                                                           gCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCttt                       <  1:191669/149‑1 (MQ=255)                                                                                                             tgt‑gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGt                                                                           >  3:237352/1‑95 (MQ=255)                                                                                                             tgt‑gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGt                                                                           <  4:237352/95‑1 (MQ=255)                                                                                                             tgt‑gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCt                                                     >  2:184336/1‑117 (MQ=255)                                                                                                             tgt‑gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCt                                                     <  1:184336/117‑1 (MQ=255)                                                                                                               t‑gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCa                     <  7:243766/147‑1 (MQ=255)                                                                                                                 gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                   <  6:47779/116‑1 (MQ=255)                                                                                                                 gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                   >  5:47779/1‑116 (MQ=255)                                                                                                                  ctgcaCCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGTCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc                  <  5:101617/144‑1 (MQ=255)                                                                                                                   cGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAccc                <  4:323728/149‑1 (MQ=255)                                                                                                                        cTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                   >  7:327142/1‑109 (MQ=255)                                                                                                                        cTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                   <  8:327142/109‑1 (MQ=255)                                                                                                                             ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGccc       <  8:382729/148‑1 (MQ=255)                                                                                                                                  gggCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTg  >  6:262350/1‑148 (MQ=255)                                                                                                                                           |                                                                                                                                           GCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGT‑GCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTG  >  NC_002947/6013748‑6014023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑