| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 196021 | 86 (1.630) | 6 (0.120) | 6/246 | NT | 6.7% | coding (1527/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | = 196641 | NA (NA) | coding (2147/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
CCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/195883‑196021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGTAGGTGATCACGCCGCCTTCGGTGACCGACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGC < NC_002947/196641‑196495 CCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGC < 1:221023/137‑1CCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGC > 2:221023/1‑137 GGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGTTGGACAGGGTCACTGTCACCGGCG < 6:229036/149‑1 CAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGTTGGACAGGGTCACTGTCACCGGCGTCTG > 5:172838/1‑149 AGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGG < 6:172838/149‑1 GATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGC < 6:41973/110‑1 GATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGC > 5:41973/1‑110 CTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGG > 2:277929/1‑108 CGGTCACCGAAGGCGACGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGTTGGACAGGGTCACTGTCACCGGCGTCTG < 3:37329/91‑1 CGGTCACCGAAGGCGACGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGTTGGACAGGGTCACTGTCACCGGCGTCTG > 4:37329/1‑91 GCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGTAGGTGATTACGCCGCCTTCGGTGACCGACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCG < 3:12919/149‑1 GCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGTAGGTGATCACGCCGCCTTCGGTGACCGACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATC > 2:57158/1‑136 CGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGTAGGTGATTACGCCGCCTTCGGTGACCGACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGg > 3:239681/1‑148 CGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGTAGGTGATTACGCCGCCTTCGGTGACCGACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGC > 7:213999/1‑145 CGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGTAGGTGATTACGCCGCCTTCGGTGACCGACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGC < 8:213999/145‑1 GTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGTAGGTGATTACGCCGCCTTCGGTGACCGACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATC < 1:167263/133‑1 GTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGTAGGTGATTACGCCGCCTTCGGTGACCGACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATC > 2:167263/1‑133 CCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/195883‑196021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGTAGGTGATCACGCCGCCTTCGGTGACCGACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGC < NC_002947/196641‑196495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |