New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 316954	59 (1.120)	4 (0.080)	4/242	NT	6.5%	coding (977/1407 nt)	dctD‑I	C4‑dicarboxylate transport transcriptional regulator
	?	NC_002947	= 316978	58 (1.150)					coding (953/1407 nt)	dctD‑I	C4‑dicarboxylate transport transcriptional regulator

GCGGCGTTCTGTAGCTCGCGGACGTTGCCTGGCCAGTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/316804‑316954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgcTGCGTATTCCGCCACTGCGTGAACGCGGCGACGACATATTGGTGTTGTTCCAGCATTTCGCCGATGCTGCCAGCCAACGTCATGGCCTGTCGCCGCATGCGCTGCAACCCGCGCAACGCGCCCTGCTGCTGCGTCATGACTGGCCAGG  <  NC_002947/316978‑316831                                                                                                                                                                                                                                                                                                             GCGGCGTTCTGTAGCTCGCGGACGTTGCCTGGCCAGTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCC                                                                                                                                                        >  4:334645/1‑149   GGCGGTCTGTAGCTTGCGGACGTTGCGTGGCCAGTCATGACTCAGCAGCAGGGCGCTTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCTTGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCGGC                                                                                                                                                      <  4:103584/149‑1                             CTGGCCAGTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACACCACCAATATGTCGTCGCCGCTGCGTATTCCGCCACTGCGTGAACGC                                                                                                                            >  3:281220/1‑149                                  CAGTCATGACGCAGAAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCCGCTGCGTATTCCGCCACTGCGTGAACGCGGCGA                                                                                                                       <  6:161594/149‑1                                   AGTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCCGCTGCGTATTCCGCCACTGCGTGAACGCGGCGAC                                                                                                                      <  6:225622/149‑1                                     TCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCCGCTGCGTATTCCGCCACTGCGTGAACGCGGCGACGA                                                                                                                    <  4:281220/149‑1                                                                                                                                                       CTGCGTATTCCGCCACTGCGTGAACGCGGCGACGACATATTGGTGTTGTTCCAGCATTTCGCCGATGCTGCCAGCCAACGTCATGGCCTGTCGCCGCATGCGCTGCAACCCGCGCAACGCGCCCTGCTGCTGCGTCATGACTGGCCAGG  <  1:61490/149‑1                                                                                                                                                                                                                                                                                                             GCGGCGTTCTGTAGCTCGCGGACGTTGCCTGGCCAGTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/316804‑316954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgcTGCGTATTCCGCCACTGCGTGAACGCGGCGACGACATATTGGTGTTGTTCCAGCATTTCGCCGATGCTGCCAGCCAACGTCATGGCCTGTCGCCGCATGCGCTGCAACCCGCGCAACGCGCCCTGCTGCTGCGTCATGACTGGCCAGG  <  NC_002947/316978‑316831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.