New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	406558 =	60 (1.140)	4 (0.080)	4/244	NT	6.8%	coding (1447/1641 nt)	aceF	AceF‑S‑acetyldihydrolipoate
	?	NC_002947	406593 =	52 (1.030)					coding (1412/1641 nt)	aceF	AceF‑S‑acetyldihydrolipoate

CCACATTGGCGGCACCGGCTTCACGCCGATCGTCAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/406595‑406558 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatgTGGCCGAGGCTGGAGATGGTGAAGCAGGCGCCTTGCATCTCGTCAGCCGACAGCTTCTTGGTGCGCGCCTTCTCGGCCAGTGCAGCGGCTTCGGCAGCCAGTTGCAGCAGGCTCTTC  >  NC_002947/406593‑406709                                                                                                                                                             CCACATTGGCGGCACCGGCTTCACGCCGATCGTCAATGTGGCCGAGGCTGGAGATGGTGAAGCAGGCGCCTTGCATCTCGTCAGCCGACAGCTTCTTGGTGCGCGCCTTCTCGGCCAGTGCAGCGGCTTCGGCAGCCAGTTGC              >  1:276581/1‑143 CCACATTGGCGGCACCGGCTTCACGCCGATCGTCAATGTGGCCGAGGCTGGAGATGGTGAAGCAGGCGCCTTGCATCTCGTCAGCCGACAGCTTCTTGGTGCGCGCCTTCTCGGCCAGTGCAGCGGCTTCGGCAGCCAGTTGC              <  2:276581/143‑1   ACATTGGCGGCACCGGCTTCACGCCGATCGTCAATGTGGCCGAGGCTGGAGATGGTGAAGCAGGCGCCTTGCATCTCGTCAGCCGACAGCTTCTTGGTGCGCGCCTTCTCGGCCAGTGCAGCGGCTTCGGCAGCCAGTTGCAGCAGGCT      >  6:265995/1‑149        GGCGGCACCGGCTTCACGCCGATCGTCAATGTGGCCGAGGCTGGAGATGGTGAAGCAGGCGCCTTGCATCTCGTCAGCCGACAGCTTCTTGGTGCGCGCCTTCTCGGCCAGTGCAGCGGCTTCGGCAGCCAGTTGCAGCAGGCTCTTC  <  5:265995/148‑1                                                                                                                                                             CCACATTGGCGGCACCGGCTTCACGCCGATCGTCAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/406595‑406558 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatgTGGCCGAGGCTGGAGATGGTGAAGCAGGCGCCTTGCATCTCGTCAGCCGACAGCTTCTTGGTGCGCGCCTTCTCGGCCAGTGCAGCGGCTTCGGCAGCCAGTTGCAGCAGGCTCTTC  >  NC_002947/406593‑406709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.