| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 578284 = | 53 (1.000) | 4 (0.080) | 3/234 | NT | 8.6% | coding (253/951 nt) | fdoH | formate dehydrogenase‑O subunit beta |
| ? | NC_002947 | 578345 = | 36 (0.740) | coding (314/951 nt) | fdoH | formate dehydrogenase‑O subunit beta | |||||
CAGTAGCCGCAGCCGATGCAGTGGTCCTGGTTGAAGTCGACGATACCGTTGGCGTGCTTGATGATCGCGCCCGGGCTCGGGCATGCCTTCAGGCAACCTGGGTCGGCACAGTGCATGCAACCGTCCTTGCGGATCAGCCACTCCAGGTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/578435‑578284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggttgccTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCGTA > NC_002947/578345‑578492 CAGTAGCCGCAGCCGATGCAGTGGTCCTGGTTGAAGTCGACGATACCGTTGGCGTGCTTGATGATCGCGCCCGGGCTCGGGCATGCCTTCAGGCAACCTGGGTCGGCACAGTGCATGCAACCGTCCTTGCGGATCAGCCACTCCAGGTT > 5:269824/1‑149CAGTAGCCGCAGCCGATGCAGTGGTCCTGGTTGAAGTCGACGATACCGTTGGCGTGCTTGATGATCGCGCCCGGGCTCGGGCATGCCTTCAGGCAACCTGGGTCGGCACAGTGCATGCAACCGTCCTTGCGGATCAGCCACTCCAGGTT > 7:79599/1‑149 GGCAACCTGGGTCGGCACAGTGCATGCAACCGTCCTTGCGGATCAGCCACTCCAGGTTGCCTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTA > 5:189436/1‑149 GGCAACCTGGGTCGGCACAGTGCATGCAACCGTCCTTGCGGATCAGCCACTCCAGGTTGCCTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGG > 5:317735/1‑140 GGCAACCTGGGTCGGCACAGTGCATGCAACCGTCCTTGCGGATCAGCCACTCCAGGTTGCCTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGG < 6:317735/140‑1 GGCACAGTGCATGCAACCGTCCTTGCGGATCAGCCACTCCAGGTTGCCTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTACTGCATCACCGGC < 6:189436/149‑1 CCAGGTTGCCTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTACTGCATCACCGGCTGCCCGTTCAA < 7:298237/122‑1 CCAGGTTGCCTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTACTGCATCACCGGCTGCCCGTTCAA > 8:298237/1‑122 GCCTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCG > 5:141870/1‑149 GCCTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGC < 4:23520/148‑1 CTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCGTA > 4:161619/1‑149 CTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCGTA > 7:143274/1‑149 CAGTAGCCGCAGCCGATGCAGTGGTCCTGGTTGAAGTCGACGATACCGTTGGCGTGCTTGATGATCGCGCCCGGGCTCGGGCATGCCTTCAGGCAACCTGGGTCGGCACAGTGCATGCAACCGTCCTTGCGGATCAGCCACTCCAGGTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/578435‑578284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggttgccTGAAGGCATGCCCGAGCCCGGGCGCGATCATCAAGCACGCCAACGGTATCGTCGACTTCAACCAGGACCACTGCATCGGCTGCGGCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCGTA > NC_002947/578345‑578492 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |