| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 784549 = | 51 (0.970) | 4 (0.080) | 4/238 | NT | 7.4% | coding (1377/3831 nt) | PP_0672 | sensory box protein |
| ? | NC_002947 | 784583 = | 52 (1.050) | coding (1343/3831 nt) | PP_0672 | sensory box protein | |||||
CTGTGGCTGATGGCGCGCCTGCCGCTGCAGCGCCGTGATTATCAGGCGGTGATCCTCAGCATCAGCGATATCACCAGCCGCAAACAGGTGGAGCTGTCGCTACTGGAACGCGAAAGTTTCTGGTCGGACGTGGTACGCACCGTACCCGACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/784701‑784549‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaccagAAACTTTCGCGTTCCAGTAGCGACAGCTCCACCTGTTTGCGGCTGGTGATATCGCTGATGCTGAGGATCACCGCCTGATAATCACGGCGCTGCAGCGGCAGGCGCGCCATCAGCCACAGGTGCAGCTCGGTGCCCTGCGGTGTCGG > NC_002947/784583‑784728 CTGTGGCTGATGGCGCGCCTGCCGCTGCAGCGCCGTGATTATCAGGCGGTGATCCTCAGCATCAGCGATATCACCAGCCGCAAACAGGTGGAGCTGTCGCTACTGGAACGCGAAAGTTTCTGGTCGGACGTGGTACGCACCGTACCCGA > 2:82370/1‑149 GTGGCTGATGGCGCGCCTGCCGCTGCAGCGCCGTGATTATCAGGCGGTGATCCTCAGCATCAGCGATATCACCAGCCGCAAACAGGTGGAGCTGTCGCTACTGGAACGCGAAAGTTTCTGGTCGGACGTGGTACGCACCGTACCCGAC > 4:97332/1‑148 TTTCTGGTCGGACGTGGTACGCACCGTACCCGACCAGAAACTTTCGCGTTCCAGTAGCGACAGCTCCACCTGTTTGCGGCTGGTGATATCGCTGATGCTGAGGATCACCGCCTGATAATCACGGCGCTGCAGCGGCAG < 7:138959/138‑1 TTTCTGGTCGGACGTGGTACGCACCGTACCCGACCAGAAACTTTCGCGTTCCAGTAGCGACAGCTCCACCTGTTTGCGGCTGGTGATATCGCTGATGCTGAGGATCACCGCCTGATAATCACGGCGCTGCAGCGGCAG > 8:138959/1‑138 GACGTGGTACGCACCGTACCCGACCAGAAACTTTCGCGTTCCAGTA < 3:13415/46‑1 GACGTGGTACGCACCGTACCCGACCAGAAACTTTCGCGTTCCAGTA > 4:13415/1‑46 CGACCAGAAACTTTCGCGTTCCAGTAGCGACAGCTCCACCTGTTTGCGGCTGGTGATATCGCTGATGCTGAGGATCACCGCCTGATAATCATGGCGCTGTAGCGGCAGGCGCGCCATCAGCCACAGGTGCAGCTCGGTGCCCTGCGGT < 4:302092/148‑1 ACCAGAAACTTTCGCGTTCCAGTAGCGACAGCTCCACCTGTTTGCGGCTGGTGATATCGCTGATGCTGAGGATCACCGCCTGATAATCACGGCGCTGCAGCGGCAGGCGCGCCATCAGCCACAGGTGCAGCTCGGTGCCCTGCGGTGTC < 8:25896/149‑1 CAGAAACTTTCGCGTTCCAGTAGCGACAGCTCCACCTGTTTGCGGCTGGTGATATCGCTGATGCTGAGGATCACCGCCTGATAATCACGGCGCTGCAGCGGCAGGCGCGCCATCAGCCACAGGTGCAGCTCGGTGCCCTGCGGTGTCGG < 1:330822/149‑1 AGAAACTTTCGCGTTCCAGTAGCGACAGCTCCACCTGTTTGCGGCTGGTGATATCGCTGATGCTGAGGATCACCGCCTGATAATCACAGCGCTGCAGCGGCAGGCGCGCCATCAGCCACAGGTGC > 1:327895/1‑125 AGAAACTTTCGCGTTCCAGTAGCGACAGCTCCACCTGTTTGCGGCTGGTGATATCGCTGATGCTGAGGATCACCGCCTGATAATCACAGCGCTGCAGCGGCAGGCGCGCCATCAGCCACAGGTGC < 2:327895/125‑1 CTGTGGCTGATGGCGCGCCTGCCGCTGCAGCGCCGTGATTATCAGGCGGTGATCCTCAGCATCAGCGATATCACCAGCCGCAAACAGGTGGAGCTGTCGCTACTGGAACGCGAAAGTTTCTGGTCGGACGTGGTACGCACCGTACCCGACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/784701‑784549‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaccagAAACTTTCGCGTTCCAGTAGCGACAGCTCCACCTGTTTGCGGCTGGTGATATCGCTGATGCTGAGGATCACCGCCTGATAATCACGGCGCTGCAGCGGCAGGCGCGCCATCAGCCACAGGTGCAGCTCGGTGCCCTGCGGTGTCGG > NC_002947/784583‑784728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |