| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 851768 = | 37 (0.700) | 3 (0.060) | 3/238 | NT | 7.0% | coding (547/1278 nt) | hemA | glutamyl‑tRNA reductase |
| ? | NC_002947 | 851831 = | 45 (0.910) | coding (610/1278 nt) | hemA | glutamyl‑tRNA reductase | |||||
CTGCCAGCAGCACGGCATGCGCGCCGAACTGCTCGGCCAGGATGCTGGCGCGCTCCAGGGTGCGGTTGGCCACCACGATACGGCGTACGCCCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/851918‑851768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagggcGTACGCCGTATCGTGGTGGCCAACCGCACCCTGGAGCGCGCCAGCATCCTGGCCGAGCAGTTCGGCGCGCATGCCGTGCTGCTGGCAGACATCCCCCAGGAACTGGCCAACAGTGACATCGTGATCAGTTCCACCGCCAGC > NC_002947/851831‑851971 CTGCCAGCAGCACGGCATGCGCGCCGAACTGCTCGGCCAGGATGCTGGCGCGCTCCAGGGTGCGGTTGGCCACCACGATACGGCGTACGCCCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAGCAGG > 8:312358/1‑149 TGCCAGCAGCACGGCATGCGCGCCGAACTGCTCGGCCAGGATGCTGGCGCGCTCCAGGGTGCGGTTGGCCACCACGATACGGCGTACGCCCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAGCAGGG > 6:206992/1‑149 GCCAGCAGCACGGCATGCGCGCCGAACTGCTCGGCCAGGATGCTGGCGCGCTCCAGGGTGCGGTTGGCCACCACGATACGGCGTACGCCCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAGCAGGGC > 3:269592/1‑149 GCCAGCAGCACGGCATGCGCGCCGAACTGCTCGGCCAGGATGCTGGCGCGCTCCAGGGTGCGGTTGGCCACCACGATACGGCGTACGCCCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAGCAGGGC > 8:221781/1‑149 CAGGATGCTGGCGCGCTCCAGGGTGCGGTTGGCCACCACGATACGGCGTACGCCCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAG > 1:340577/1‑108 CAGGATGCTGGCGCGCTCCAGGGTGCGGTTGGCCACCACGATACGGCGTACGCCCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAG < 2:340577/108‑1 CCCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAGCAGGGCGTACGCCGTATCGTGGTGGCCAACCGCACCCTGGAGCGCGCCAGCATCCTGGCCGAGCAGTTCGGCGCGCATGCCGTGCTGCTGG > 7:55176/1‑147 CCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAGCAGGGCGTACGCCGTATCGTGGTGGCCAACCGCACCCTGGAGCGCGCCAGC < 3:325675/106‑1 CCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAGCAGGGCGTACGCCGTATCGTGGTGGCCAACCGCACCCTGGAGCGCGCCAGC > 4:325675/1‑106 CAGGGCGTACGCCGTATCGTGGTGGCCAACCGCACCCTGGAGCGCGCCAGCATCCTGGCCGAGCAGTTCGGCGCGCATGCCGTGCTGCTGGCAGACATCCCCCAGGAACTGGCCAACAGTGACATCGTGATCAGTTCCACCGCCAGC > 2:88436/1‑147 CAGGGCGTACGCCGTATCGTGGTGGCCAACCGCACCCTGGAGCGCGCCAGCATCCTGGCCGAGCAGTTCGGCGCGCATGCCGTGCTGCTGGCAGACATCCCCCAGGAACTGGCCAACAGTGACATCGTGATCAGTTCCACCGCCAGC > 5:200126/1‑147 CTGCCAGCAGCACGGCATGCGCGCCGAACTGCTCGGCCAGGATGCTGGCGCGCTCCAGGGTGCGGTTGGCCACCACGATACGGCGTACGCCCTGCTCGTGCAGGTGGCGGGCGACCAGGGTGATGGTTTCGCCGGCACCGATCAGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/851918‑851768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagggcGTACGCCGTATCGTGGTGGCCAACCGCACCCTGGAGCGCGCCAGCATCCTGGCCGAGCAGTTCGGCGCGCATGCCGTGCTGCTGGCAGACATCCCCCAGGAACTGGCCAACAGTGACATCGTGATCAGTTCCACCGCCAGC > NC_002947/851831‑851971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |