| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 913904 = | 61 (1.150) | 4 (0.080) | 4/246 | NT | 5.7% | coding (615/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
| ? | NC_002947 | 913941 = | 73 (1.430) | coding (652/1743 nt) | fruA | PTS fructose transporter subunit IIBC | |||||
ACCACCATCGGAAGCATGAACGAGACGCCGGTCAGCAAGTGCTTGTACACGCCG‑GTTTTCTCGCTCTTGGTCGGCGTGGTCGCCGCTGCAGCGTCGGCACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/914053‑913904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACGGTGGAAAACGGTGCCGACGCTGCAGCGGCGACCACGCCGACCAAGAGCGAGAAAACCGGCGTGTACAAGCACTTGCTGACCGGCGTCTCGTT > NC_002947/913941‑914035 ACCACCATCGGAAGCATGAACGAGACGCCGGTCAGCAAGTGCTTGTACACGCCG‑GTTTTCTCGCTCTTGGTCGGCGTGGTCGCCGCTGCAGCGTCGGCACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGC > 2:253902/1‑149ACCACCATCGGAAGCATGAACGAGACGCCGGTCAGCAAGTGCTTGTACACGCCG‑GTTTTCTCGCTCTTGGTCGGCGTGGTCGCCGCTGCAGCGTCGGCACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGC < 7:138613/149‑1 CCACCATCGGAAGCATGAACGAGACGCCGGTCAGCAAGTGCTTGTACACGCCG‑GTTTTCTCGCTCTTGGTCGGCGTGGTCGCCGCTGCAGCGTCGGCACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGCC < 1:54049/149‑1 CCACCATCGGAAGCATGAACGAGACGCCGGTCAGCAAGTGCTTGTACACGCCG‑GTTTTCTCGCTCTTGGTCGGCGTGGTCGCCGCTGCAGCGTCGGCACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGCC < 5:253443/149‑1 CACCATCGGAAGCATGAACGAGACGCCGGTCAGCAAGTGCTTGTACACGCCGAGATTTCTCGCTCTAGGTCGCCGTCGTCGCCGCTGCAGCGTCGGCACCGTTTACCAACGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGAGGGCC > 1:92004/1‑149 ACGCCG‑GTTTTCTCGCTCTTGGTCGGCGTGGTCGCCGCTGCAGCGTCGGCACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGC < 5:172647/101‑1 ACGCCG‑GTTTTCTCGCTCTTGGTCGGCGTGGTCGCCGCTGCAGCGTCGGCACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGC > 6:172647/1‑101 ACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGCCACGGTGGAAAACGGTGCCGACGCTGCAGCGGCGACCACGCCGACCAAGAGCGAGAAAACCGGCGTGTACAAGCACTTGCTGA < 3:257188/134‑1 ACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGCCACGGTGGAAAACGGTGCCGACGCTGCAGCGGCGACCACGCCGACCAAGAGCGAGAAAACCGGCGTGTACAAGCACTTGCTGA > 4:257188/1‑134 CGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGCCACGGTGGAAAACGGTGCCGACGCTGCAGCGGCGACCACGCCGACCAAGAGCGAGAAAACCGGCGTGTACAAGCACTTGCTGACCGGCGTCTCGTT < 5:113842/135‑1 CGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGCCACGGTGGAAAACGGTGCCGACGCTGCAGCGGCGACCACGCCGACCAAGAGCGAGAAAACCGGCGTGTACAAGCACTTGCTGACCGGCGTCTCGTT > 6:113842/1‑135 ACCACCATCGGAAGCATGAACGAGACGCCGGTCAGCAAGTGCTTGTACACGCCG‑GTTTTCTCGCTCTTGGTCGGCGTGGTCGCCGCTGCAGCGTCGGCACCGTTTTCCACCGTGGCCTGCGCCAGGGCTTTGTCCAGGGTAGCGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/914053‑913904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACGGTGGAAAACGGTGCCGACGCTGCAGCGGCGACCACGCCGACCAAGAGCGAGAAAACCGGCGTGTACAAGCACTTGCTGACCGGCGTCTCGTT > NC_002947/913941‑914035 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |