| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1157415 = | 57 (1.080) | 4 (0.080) | 3/240 | NT | 7.2% | coding (903/1251 nt) | yihS | aldose‑ketose isomerase |
| ? | NC_002947 | 1157457 = | 49 (0.980) | coding (945/1251 nt) | yihS | aldose‑ketose isomerase | |||||
AGCAGCAGCGGTACCACTGTTCGTAATGCGCCTCGCCGGTGCGTTGCAACAGGGCTGCCGCAGCCGCGCAAGCCTCAGCGTGCACCCAGTGCAATCGTGCATGCACCACCGGGCGATCAGCCCAGTCCAGCGTATAGACGAAGCCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1157563‑1157415‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggtGGTGCATGCACGATTGCACTGGGTGCACGCTGAGGCTTGCGCGGCTGCGGCAGCCCTGTTGCAACGCACCGGCGAGGCGCATTACGAACAGTGGTACCGCTGCTGCTGGGGCTTTATCGCCAACCATTTCATCGACCCCATTGGCGG > NC_002947/1157457‑1157603 AGCAGCAGCGGTACCACTGTTAGTTATGCGCCACGCCGGTGCGTTGCAACAGGGCTGCCGCAGCCGCGCAAGCCTCAGCGTGCACCCAGTGCAATCGTGCATGCACCACCGGGCGATAACCCCAGTCCAGCGTATAGCCGAACCCCGGT > 2:48885/1‑149 CACCGGGCGATCAGCCCAGTCCAGCGTATAGACGAAGCCCGGTGGTGCATGCACGATTGCACTGGGTGCACGCTGAGGCTTGCGCGGCTGCGGCAGCCCTGTTGCAACGCACCGGCGAGGCGCATTACGAACAGTGGTACCGCTGCTGC > 3:50442/1‑149 CACCGGGCGATCAGCCCAGTCCAGCGTATAGACGAAGCCCGGTGGTGCATGCACGATTGCACTGGGTGCACGCTGAGGCTTGCGCGGCTGCGGCAGCCCTGTTGCAACGCACCGGCGAGGCGCATTACGAACAGT < 1:145713/135‑1 CACCGGGCGATCAGCCCAGTCCAGCGTATAGACGAAGCCCGGTGGTGCATGCACGATTGCACTGGGTGCACGCTGAGGCTTGCGCGGCTGCGGCAGCCCTGTTGCAACGCACCGGCGAGGCGCATTACGAACAGT > 2:145713/1‑135 CCGGGCGATCAGCCCAGTCCAGCGTATAGACGAAGCCCGGTGGTGCATGCACGATTGCACTGGGTGCACGCTGAGGCTTGCGCGGCTGCGGCAGCCCTGTTGCAACGCACCGGCGAGGCGCATTACGAACAGTGGTACCGCTGCTGCTG > 1:137959/1‑149 CCGGTGGTGCATGCACGATTGCACTGGGTGCACGCTGAGGCTTGCGCGGCTGCGGCAGCCCTGTTGCAACGCACCGGCGAGGCGCATTACGAACAGTGGTACCGCTGCTGCTGGGGCTTTATCGCCAACCATTTCATCGACCCCATTGG < 3:148943/149‑1 GTGGTGCATGCACGATTGCACTGGGTGCACGCTGAGGCTTGCGCGGCTGCGGCAGCCCTGTTGCAACGCACCGGCGAGGCGCATTACGAACAGTGGTACCGCTGCTGCTGGGGCTTTATCGCCAACCATTTCATCGACCCCATTGGCGG < 6:359839/149‑1 AGCAGCAGCGGTACCACTGTTCGTAATGCGCCTCGCCGGTGCGTTGCAACAGGGCTGCCGCAGCCGCGCAAGCCTCAGCGTGCACCCAGTGCAATCGTGCATGCACCACCGGGCGATCAGCCCAGTCCAGCGTATAGACGAAGCCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1157563‑1157415‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggtGGTGCATGCACGATTGCACTGGGTGCACGCTGAGGCTTGCGCGGCTGCGGCAGCCCTGTTGCAACGCACCGGCGAGGCGCATTACGAACAGTGGTACCGCTGCTGCTGGGGCTTTATCGCCAACCATTTCATCGACCCCATTGGCGG > NC_002947/1157457‑1157603 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |