New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1172789	57 (1.080)	4 (0.080)	4/240	NT	6.6%	coding (264/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit
	?	NC_002947	= 1172829	60 (1.200)					coding (224/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit

AACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1172655‑1172789 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCCTGAA  <  NC_002947/1172829‑1172682                                                                                                                                                                                                                                                                                             AACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCGGGTACGCCAGGCG                                                                                                                                        >  1:348958/1‑149                 CGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCAGCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTG                                                                                                                                                            <  1:137187/113‑1                 CGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCAGCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTG                                                                                                                                                            >  2:137187/1‑113                 CGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGG                                                                                                                        <  2:348958/149‑1                                            CCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCAA                                                                                                     >  5:93199/1‑141                                            CCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCAA                                                                                                     <  6:93199/141‑1                                                                                                                                      GCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTGCCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCCTG    >  3:103640/1‑148                                                                                                                                       CGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGCGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGAGACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCCTGAA  <  8:98818/149‑1                                                                                                                                                                                                                                                                                             AACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1172655‑1172789 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCCTGAA  <  NC_002947/1172829‑1172682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.