| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1316938 = | 56 (1.060) | 4 (0.080) | 4/238 | NT | 7.4% | coding (356/1989 nt) | PP_1150 | membrane protein |
| ? | NC_002947 | 1316977 = | 47 (0.950) | coding (395/1989 nt) | PP_1150 | membrane protein | |||||
GCTGCTCGACCCGCATGGGCCAGAGCAAGGCACTGCTGGCTGTTGCACAGAAAATACCCAGGCAGATCTCGGTACAGCGAGCCACGGCCTGGTCGAATACTTGCAGGGGGTGGTCAATGGCCGGCAAGGCGATGATCGCTGCGGTGTAGCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1317093‑1316938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggccaTTGACCACCCCCTGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGAGCAGCAACTGGGCGGGCAGGCGCGGCAGGCCTGGCA > NC_002947/1316977‑1317124 GCTGCTCGACCCGCATGGGCCAGAGCAAGGCACTGCTGGCTGTTGCACAGAAAATACCCAGGCAGATCTCGGTACAGCGAGCCACGGCCTGGTCGAATACTTGCAGGGGATGGTCAATGGCCGGCAAGGCGATGATCGCTGCGGTGTAG > 6:111076/1‑149 GCTCGACCCGCATGGGCCAGAGCAAGGCACTGCTGGCTGTTGCACAGAAAATACCCAGGCAGATCTCGGTACAGCGAGCCACGGCCTGCTCGAATACTTGCAGGGGGTGGTCAATGGCCGGCAAGGCGATGATCGCTGCGGTGTAGCCG > 5:4563/1‑149 CAGAAAATACCCAGGCAGATCTCGGTACAGCGAGCCACGGCCTGGTCGAATACTTGCAGGGGGTGGTCAATGGCCGGCAAGGCGATGATCGCTGCGGTGTAGCCGGCC < 4:82147/108‑1 CAATGGCCGGCAAGGCGATGATCGCTGCGGTGTAGCCGGCCATTGACCACCCCCTGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGT > 5:113212/1‑128 CAATGGCCGGCAAGGCGATGATCGCTGCGGTGTAGCCGGCCATTGACCACCCCCTGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGT < 6:113212/128‑1 AATGGCCGGCAAGGCGATGATCGCTGCGGTGTAGCCGGCCATTGACCACCCCCTGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTG < 5:211747/133‑1 AATGGCCGGCAAGGCGATGATCGCTGCGGTGTAGCCGGCCATTGACCACCCCCTGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTG > 6:211747/1‑133 GCCGGCCATTGACCACCCCCTGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGAGCAGCAACTGGGCGGGCAGGCGCGGCAG < 3:60411/148‑1 CGGCCATTGACCACCCCCCGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGAGCAGCAACTGGGCGGGCAGGCGCGGCAGGCC < 1:339864/149‑1 CATTGACCACCCCCTGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGAGCAGCAACTGGGCGGGCAGGCGCGGCAGGCCTGGC < 5:183257/149‑1 ATTGACCACCCCCTGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGAGCAGCAACTGGGCGGGCAGGCGCGGCAGGCCTGGCA > 5:26378/1‑149 GCTGCTCGACCCGCATGGGCCAGAGCAAGGCACTGCTGGCTGTTGCACAGAAAATACCCAGGCAGATCTCGGTACAGCGAGCCACGGCCTGGTCGAATACTTGCAGGGGGTGGTCAATGGCCGGCAAGGCGATGATCGCTGCGGTGTAGCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1317093‑1316938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggccaTTGACCACCCCCTGCAAGTATTCGACCAGGCCGTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGAGCAGCAACTGGGCGGGCAGGCGCGGCAGGCCTGGCA > NC_002947/1316977‑1317124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |