| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1456210 = | 51 (0.970) | 4 (0.080) | 4/246 | NT | 6.9% | coding (773/813 nt) | PP_1274 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 1456264 = | 59 (1.150) | coding (719/813 nt) | PP_1274 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
CGCAGGACAAGCCAACGTCGGCGGCGGTATTTGCCCAAGGCGTGCTGGCAGCCGTCGGCAAGTCGCCGGCGCCCGCGGTGGTACGTTTGGGGAATGGCAGTACAGCCTTGCCGCTGATGGCACGGTTGCTGCCGCGGCGGTTGCTGGACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1456360‑1456210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actgCCATTCCCCAAACGTACCACCGCGGGCGCCGGCGACTTGCCGACGGCTGCCAGCACGCCTTGGGCAAATACCGCCGCCGACGTTGGCTTGTCCTGCGATGCCCGCGCCCGCGCCTGCACAT > NC_002947/1456264‑1456384 CGCAGGACAAGCCAACGTCGGCGGCGGTATTTGCCCAAGGCGTGCTGGCAGCCGTCGGCAAGTCGCCGGCGCCCGCGGTGGTACGTTTGGGGAATGGCAGTACAGCCTTGCCGCTGATGGCACGGTTGCTGCCGCGGCGGTTGCTGGAC > 2:345731/1‑149 GCAGGACAAGCCAACGTCGGCGGCGGTATTTGCCCAAGGCGTGCTGGCAGCCGTCGGCAAGTCGCCGGCGCCCGCGGTGGTACGTTTGGGGAATGGCAGTACAGCCTTGCCGCTGATGGCACGGTTGCTGCCGCGGCGGTTGCTGGAC < 1:301291/148‑1 TGGCAGTACAGCCTTGCCGCTGATGGCACGGTTGCTGCCGCGGCGGTTGCTGGACTGCCATTCCCCAAACGTACCACCGCGGGCGCCGGCGACTTGCCGACGGCTGCCAGCACGCCTTGGGCAAATACCGCCGCCGACGTTGGCTTGTC > 8:268320/1‑149 CAGTACAGCCTTGCCGCTGATGGCACGGTTGCTGCCGCGGCGGTTGCTGGACTGCCATTCCCCAAACGTACCACCGCGGGCGCCGGCGACTTGCCGACGGCTGCCAGCACGCCTTGGGCAAATACCGCCGCCGACGTTGGCTTGTCCTG > 6:210078/1‑149 CAGCCTTGCCGCTGATGGCACGGTTGCTGCCGCGGCGGTTGCTGGACTGCCATTCCCCAAACGTACCACCGCGGGCGCCGGCGACTTGCCGACGGCTGCCAGCACGCCTTGGGCAAATACCGCCGCCGACGTTGGCTTGTCCTGCGAT < 7:268320/148‑1 GGTTGCTGCCGCGGCGGTTGCTGGACTGCCATTCCCCAAACGTACCACCGCGGGCGCCGGCGACTTGCCGACGGCTGCCAGCACGCCTTGGGCAAATACCGCCGCCGACGTTGGCTTGTCCTGCGATGCCCGCGCCCGCGCCTGCACAT < 5:210078/149‑1 CGCAGGACAAGCCAACGTCGGCGGCGGTATTTGCCCAAGGCGTGCTGGCAGCCGTCGGCAAGTCGCCGGCGCCCGCGGTGGTACGTTTGGGGAATGGCAGTACAGCCTTGCCGCTGATGGCACGGTTGCTGCCGCGGCGGTTGCTGGACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1456360‑1456210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actgCCATTCCCCAAACGTACCACCGCGGGCGCCGGCGACTTGCCGACGGCTGCCAGCACGCCTTGGGCAAATACCGCCGCCGACGTTGGCTTGTCCTGCGATGCCCGCGCCCGCGCCTGCACAT > NC_002947/1456264‑1456384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |