New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1488528 | 29 (0.550) | 4 (0.080) | 4/244 | NT | 12.1% | coding (86/759 nt) | ybgI | metal‑binding hydrolase/oxidase |
? | NC_002947 | = 1488537 | 30 (0.590) | coding (95/759 nt) | ybgI | metal‑binding hydrolase/oxidase |
CGGCATTATACGGGCGTTCGTCAGGCGTTGCGCCCGAGAAAAGCGCAGTTTTCGAGGAGATTTTCATGGCCGTCGCTCTAAACACCCTGGTCGAGGAAGCCGAGCGTTACCTGGGCAGCGCGAAGATCCAGGATTATTGCCCAAATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1488378‑1488528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctTCGACCTGCAGGCCATTTGGGCAATAATCCTGGATCTTCGCGCTGCCCAGGTAACGCTCGGCTTCCTCGACCAGGGTGTTTAGAGCGACGGCCATGAAAATCTCCTCGAAAACTGCGCTTTTCTCGGGCGCAACGCCTGACGAACGCC < NC_002947/1488537‑1488390 CGGCATTATACGGGCGTTCGTCAGGCGTTGCGCCCGAGAAAAGCGCAGTTTTCGAGGAGATTTTCATGGCCGTCGCTCTAAACACCCTGGTCGAGGAAGCCGAGCGTTACCTGGGCAGCGCGAAGATCCAGGATTATTGCCCAAATGGC < 5:177072/149‑1 AGGCGTTGCGCCCGATAAAAGCGCAGATTTCGAGGAGATTTTCATGGCCGTGGCTCTAAACACCCTGGTCGAGGAAGCCGAGCGTTACCTGGGCAGCGCGAAGATCCAGGATTATTGCCCAAATGGCCTTCGACCTGCAGGCCATTTG < 5:78993/148‑1 CAGGATTATTGCCCAAATGGCCTGCAGGTCGAAGGCCATTTGGGCAATAATCCTGGATCTTCGCGCTGCCCAGGTAACGCTCGGCTTCCTCGACCAGGGTGTTTAGAGCGACGGCCATGAAAATCTCCTCGAAAACTGCGCTTTTCTCG > 1:29821/1‑149 AGGATTATTGCCCAAATGGCCTGCAGGTCGAAGGCCATTTGGGCAATAATCCTGGATCTTCGCGCTGCCCAGGTAACGCTCGGCTTCCTCGACCAGGGT > 3:99302/1‑99 AGGATTATTGCCCAAATGGCCTGCAGGTCGAAGGCCATTTGGGCAATAATCCTGGATCTTCGCGCTGCCCAGGTAACGCTCGGCTTCCTCGACCAGGGT < 4:99302/99‑1 GGCCTTCGACCTGCAGGCCATTTGGGCAATAATCCTGGATCTTCGCGCTGCCCAGGTAACGCTCGGCTTCCTCGACCAGGGTGTTTAGAGCGACGGCCATGAAAATCTCCTCGAAAACTGCGCTTTTCTCGGGCGCAACGCCTGACGAA < 3:221965/149‑1 TTCGACCTGCAGGCCATTTGGGCAATAATCCTGGATCTTCGCGCTGCCCAGGTAACGCTCGGCTTCCTCGACCAGGGTGTTTAGAGCGACGGCCATGAAAATCTCCTCGAAAACTGCGCTTTTCTCGGGCGCAACGCCTGACGAACGCC > 7:215618/1‑149 CGGCATTATACGGGCGTTCGTCAGGCGTTGCGCCCGAGAAAAGCGCAGTTTTCGAGGAGATTTTCATGGCCGTCGCTCTAAACACCCTGGTCGAGGAAGCCGAGCGTTACCTGGGCAGCGCGAAGATCCAGGATTATTGCCCAAATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1488378‑1488528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctTCGACCTGCAGGCCATTTGGGCAATAATCCTGGATCTTCGCGCTGCCCAGGTAACGCTCGGCTTCCTCGACCAGGGTGTTTAGAGCGACGGCCATGAAAATCTCCTCGAAAACTGCGCTTTTCTCGGGCGCAACGCCTGACGAACGCC < NC_002947/1488537‑1488390 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |