| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1684586 = | 66 (1.250) | 3 (0.060) | 3/240 | NT | 5.0% | coding (286/333 nt) | hicB | HicB family nuclease |
| ? | NC_002947 | 1684636 = | 51 (1.020) | coding (236/333 nt) | hicB | HicB family nuclease | |||||
AGCATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1684737‑1684586‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagagcaGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATCACGTCAC > NC_002947/1684636‑1684783 AGCATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGA < 5:174653/149‑1AGCATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGA < 5:193678/149‑1 ATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA > 4:110842/1‑149 ATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA > 4:69085/1‑149 GAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA < 2:130678/145‑1 GAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA > 1:130678/1‑145 AAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAA < 5:98429/139‑1 AAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAA > 6:98429/1‑139 CCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCC > 8:307125/1‑105 CCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCC < 7:307125/105‑1 TGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAAT > 5:299423/1‑149 AAAAGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGAT < 6:299423/149‑1 AGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATCAC < 1:88655/149‑1 GAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCT < 5:212028/117‑1 GAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCT > 6:212028/1‑117 CAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATCACGTCA > 5:129111/1‑149 CAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATCACGTCA > 1:288973/1‑149 AGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGATCTCACTGATTGATTCACCGTGAAAGCCGATCACGTCAC < 6:174653/149‑1 AGCATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1684737‑1684586‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagagcaGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATCACGTCAC > NC_002947/1684636‑1684783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |