| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1716100 | 60 (1.140) | 5 (0.100) | 4/242 | NT | 7.2% | coding (216/690 nt) | PP_1511 | hypothetical protein |
| ? | NC_002947 | = 1716127 | 72 (1.430) | coding (243/690 nt) | PP_1511 | hypothetical protein | |||||
GGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1715948‑1716100‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcaGTTGGCCGACGCCGGGCTGTCGGCTTGTGCCCGGTAACGCAGGTGGCTGGTTTCCAGCGCCTGCCGGCACAGCGTTGGGTCATCGCGTAGGCGCGACAGTTTGTAGGGGGTCAGCAGGTTGGGCGGCTGGCGTACGTCCAGCGGCG < NC_002947/1716127‑1715982 GGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGAGCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCG < 4:337879/149‑1 aagggtGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGG < 3:114416/143‑1 TGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGG > 3:195583/1‑148 CCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCAGTTGGCCGACGCCGGGCTGTCGG > 4:64418/1‑149 GACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCAGTTGGCCGACGCCGGGCTGTCGGCTTGTGCCCGGTAAC < 3:64418/149‑1 ACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGC > 7:93237/1‑109 ACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGC < 8:93237/109‑1 CCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCAGTTGGCCGACGCCGGGCTGTCGGCTTGTGCCCG > 3:75662/1‑113 CCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCAGTTGGCCGACGCCGGGCTGTCGGCTTGTGCCCG < 4:75662/113‑1 GACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCAGTTGGCCGACGCCGGGCTGTCGGCTTGTGCCCG < 8:145168/87‑1 GCAGTTGGCCGACGCCGGGCTGTCGGCTTGTGCCCGGTAACGCAGGTGGCTGGTTTCCAGCGCCTGCCGGCACAGCGTTGGGTCATCGCGTAGGCGCGACAGTTTGTAGGGGGTCAGCAGGTTGGGCGGCTGGCGTACGTCCAGCGGCG > 2:225124/1‑149 GCAGTTGGCCGACGCCGGGCTGTCGGCTTGTGCCCGGTAACGCAGGTGGCTGGTTTCCAGCGCCTGCCGGCACAGCGTTGGGTCATCGCGTAGGCGCGACAGTTTGTAGGGGGTCAGCAGGTTGGGCGGCTGGCGTACGTCCAGCGGCG > 6:30391/1‑149 GGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1715948‑1716100‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcaGTTGGCCGACGCCGGGCTGTCGGCTTGTGCCCGGTAACGCAGGTGGCTGGTTTCCAGCGCCTGCCGGCACAGCGTTGGGTCATCGCGTAGGCGCGACAGTTTGTAGGGGGTCAGCAGGTTGGGCGGCTGGCGTACGTCCAGCGGCG < NC_002947/1716127‑1715982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |