| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1816815 = | 67 (1.270) | 6 (0.120) | 6/242 | NT | 8.9% | coding (687/750 nt) | surE | 5'‑nucleotidase SurE |
| ? | NC_002947 | 1816847 = | 59 (1.170) | coding (719/750 nt) | surE | 5'‑nucleotidase SurE | |||||
CCCTCTTCGCACAAGCGCTGGATCAGCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1816966‑1816815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagcAGCTCGATGGTTGGCTGGAGGGCCTGCTCTGATGCGTGAGGACGATATGCTGCGGCGTGGCATCGGCATGACCTCTCAGCGTACCCGGGAGCGGCTGATCCAGCGCTTGTGC > NC_002947/1816847‑1816958 CCCTCTTCGCACAAGCGCTGGATCAGCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCG > 4:53552/1‑149CCCTCTTCGCACAAGCGCTGGATCAGCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTC > 3:136949/1‑148 CCTCTTCGCACAAGCGCTGGATCAGCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGA < 7:291505/149‑1 TTCGCACAAGCGCTGGATCAGCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGA > 5:234824/1‑145 TTCGCACAAGCGCTGGATCAGCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGA < 6:234824/145‑1 AGCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGA > 3:342715/1‑126 AGCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGA < 4:342715/126‑1 GCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTC > 5:274562/1‑123 GCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTC < 6:274562/123‑1 GAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCATAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGT < 8:149425/104‑1 ATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGAGCAGCTCGATGGTTGGCTGGAGGGCCTGCTCTGATGCGTGAGGACGATATGCTGCGGCGTGGCATCGGCATGACCTCTCAGCGTACCCGGGAGCGGCTGATCCAGCGCTTG > 3:58136/1‑149 GAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGAGCAGCTCGATGGTTGGCTGGAGGGCCTGCTCTGATGCGTGAGGACGATATGCTGCGGCGTGGCATCGGCATGACCTCTCAGCGTACCCGGGAGCGGCTGATCCAGCGCTTGTGC < 4:58136/149‑1 AGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGAGCAGCTCGATGGTTGGCTGGAGGGCCTGCTCTGATGCGTGAGGACGATATGCTGCGGCGTGGCATCGGC < 7:94850/103‑1 AGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGAGCAGCTCGATGGTTGGCTGGAGGGCCTGCTCTGATGCGTGAGGACGATATGCTGCGGCGTGGCATCGGC > 8:94850/1‑103 TGCTCGAAGGCATCATTGAAGGTGCGGTCGAGCAGCTCGATGGTTGGCTGGAGGGCCTGCTCTGATGCGTGAGGACGATATGCTGCGGCGTGGCATCGGCATGACCTCTCAGCGTACCCGGGAGCGGCTGATCCAGCGCTTGT < 7:138009/143‑1 TGCTCGAAGGCATCATTGAAGGTGCGGTCGAGCAGCTCGATGGTTGGCTGGAGGGCCTGCTCTGATGCGTGAGGACGATATGCTGCGGCGTGGCATCGGCATGACCTCTCAGCGTACCCGGGAGCGGCTGATCCAGCGCTTGT > 8:138009/1‑143 CCCTCTTCGCACAAGCGCTGGATCAGCCGCTCCCGGGTACGCTGAGAGGTCATGCCGATGCCACGCCGCAGCATATCGTCCTCACGCATCAGAGCAGGCCCTCCAGCCAACCATCGAGCTGCTCGAAGGCATCATTGAAGGTGCGGTCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1816966‑1816815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagcAGCTCGATGGTTGGCTGGAGGGCCTGCTCTGATGCGTGAGGACGATATGCTGCGGCGTGGCATCGGCATGACCTCTCAGCGTACCCGGGAGCGGCTGATCCAGCGCTTGTGC > NC_002947/1816847‑1816958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |