New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1922701 = | 49 (0.930) | 5 (0.100) | 4/234 | NT | 9.3% | coding (543/990 nt) | PP_1722 | ABC transporter ATP‑binding protein |
? | NC_002947 | 1922758 = | 52 (1.070) | coding (486/990 nt) | PP_1722 | ABC transporter ATP‑binding protein |
CCGCACCAGCTTTCCGGCGGCCAGTGCCAGCGCGTGGCCCTGGCACGCTCACTGGTCACCCGCCCGCGCCTGCTGCTGCTCGACGAACCGTTGTCGGCGCTGGATGCGCGTATCCGCAAGCACCTGCGCGAGCAGATTCGTGCCATCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1922853‑1922701 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccagcgcCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGCCCAGCTCCACCAGCTCCAGTACCTCGCG > NC_002947/1922758‑1922901 CCGCACCAGCTTTCCGGCGGCCAGTGCCAGCGCGTGGCCCTGGCACGCTCACTGGTCACCCGCCCGCGCCTGCTGCTGCTCGACGAACCGTTGTCGGCGCTGGATGCGCGTATCCGCAAGCACCTGCGCGAGCAGATTCGTGCCATCCA < 3:337403/149‑1 CGCTGGATGCGCGTATCCGCAAGCACCTGCGCGAGCAGATTCGTGCCATCCAGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTG > 1:329658/1‑149 CGCTGGATGCGCGTATCCGCAAGCACCTGCGCGAGCAGATTCGTGCCATCCAGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGT < 5:62983/108‑1 CGCTGGATGCGCGTATCCGCAAGCACCTGCGCGAGCAGATTCGTGCCATCCAGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGT > 6:62983/1‑108 GATGCGCGTATCCGCAAGCACCTGCGCGAGCAGATTCGTGCCATCCAGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGG > 8:224345/1‑148 ATGCGCGTATCCGCAAGCACCTGCGCGAGCAGATTCGTGCCATCCAGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTA < 7:224345/149‑1 CATCCAGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGCCC > 1:44242/1‑128 CATCCAGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGCCC < 2:44242/128‑1 CAGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGCCCAGCTCCACCAGCTCCAGTACCTCGC < 1:102133/149‑1 AGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGCCCAGCTCCAC > 7:114916/1‑131 AGCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGCCCAGCTCCAC < 8:114916/131‑1 GCGCCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGCCCAGCTCCACCAGCTCCAGTACCTCGCG > 5:64659/1‑148 CCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGC > 5:245313/1‑117 CCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGC < 6:245313/117‑1 CCGCACCAGCTTTCCGGCGGCCAGTGCCAGCGCGTGGCCCTGGCACGCTCACTGGTCACCCGCCCGCGCCTGCTGCTGCTCGACGAACCGTTGTCGGCGCTGGATGCGCGTATCCGCAAGCACCTGCGCGAGCAGATTCGTGCCATCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1922853‑1922701 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccagcgcCGACAACGGTTCGTCGAGCAGCAGCAGGCGCGGGCGGGTGACCAGTGAGCGTGCCAGGGCCACGCGCTGGCACTGGCCGCCGGAAAGCTGGTGCGGGTAGCGCCCGGCGAACTTGCCCAGCTCCACCAGCTCCAGTACCTCGCG > NC_002947/1922758‑1922901 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |