| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1958842 | 65 (1.230) | 4 (0.080) | 4/246 | NT | 5.8% | coding (222/1395 nt) | fumC‑II | class 2 fumarate hydratase |
| ? | NC_002947 | = 1958879 | 68 (1.330) | coding (185/1395 nt) | fumC‑II | class 2 fumarate hydratase | |||||
GCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAGACGACGAGCGGGAACTGATCGTCGTGCTGGCCATCCAGCACTTCATCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1958738‑1958842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACCTGCCGGCCGACATCGCCCGGTTGATCGAACAGGCCGCCGATGAAGTGCTGGATGGCCAGCACGACGATCAGTTCCCGCTCGTCGTCTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACG < NC_002947/1958879‑1958732 GCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAGACGACGAGCGGGAACTGATCGTCGTGCTGGCCATCCAGCACTTCATCGGCGACCTGCCGGCCGACATCGCCCGGTTGATCGAACAGGCCGCCGA > 5:100641/1‑148GCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAGACGACGAGCGGGAACTGATCGTCGTGCTGGCCATCCAGCACTTCATCGGCGACCTGCCGGCCGACATCGCCCGGTTGATCGAACAGGCCGCCGA < 6:100641/148‑1 GCTTTGGGTGCCACTGCCCGTCTGCCAGACGACGAGCGGGAACTGATCGTCGTGCTGGCCATCCAGCACTTCATCGGCGACCTGCCGGCCGACATCGCCCGGTTGATCGAACAGGCCGC > 7:257758/1‑119 GCTTTGGGTGCCACTGCCCGTCTGCCAGACGACGAGCGGGAACTGATCGTCGTGCTGGCCATCCAGCACTTCATCGGCGACCTGCCGGCCGACATCGCCCGGTTGATCGAACAGGCCGC < 8:257758/119‑1 GACCTGCCGGCCGACATCGCCCGGTTGATCGAACAGGCCGCCGATGAAGTGCTGGATGGCCAGCACGACGATCAGTTCCCGCTCGTCGTCTGGCAGACGGGCAGTGGCACCCAAAGCAACTTGAACGTCAACGAGGTGATCGCCGGACG > 1:300679/1‑149 GCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAGACGACGAGCGGGAACTGATCGTCGTGCTGGCCATCCAGCACTTCATCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1958738‑1958842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACCTGCCGGCCGACATCGCCCGGTTGATCGAACAGGCCGCCGATGAAGTGCTGGATGGCCAGCACGACGATCAGTTCCCGCTCGTCGTCTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACG < NC_002947/1958879‑1958732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |