| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2059976 | 54 (1.020) | 4 (0.080) | 4/236 | NT | 6.9% | coding (653/939 nt) | PP_1836 | ZIP family metal transporter |
| ? | NC_002947 | = 2060009 | 57 (1.160) | coding (620/939 nt) | PP_1836 | ZIP family metal transporter | |||||
TAGGCGAGGGCAAAGCCGGTAGAAATCCCCAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2059847‑2059976‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagtgccaTCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTGGCGATAGGGTCGGGCCTGATGGAGCCGCTAGGGGCGGTGATCGGGCTGGGGATTTCTACCG < NC_002947/2060009‑2059863 TAGGCGAGGGCAAAGCCGGTAGAAATCCCCAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCC < 1:56176/123‑1TAGGCGAGGGCAAAGCCGGTAGAAATCCCCAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCC > 2:56176/1‑123 GTAGAAATCCCCAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGT < 7:208800/108‑1 GTAGAAATCCCCAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGT > 8:208800/1‑108 CCAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCT > 5:333215/1‑147 CCAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCT < 6:333215/147‑1 CAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGG < 3:13024/143‑1 CAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGG > 4:13024/1‑143 CAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTGGCGATAGGGTCGGGCCTGATGGAGCCGCTAGGGGCGGTGATCGGG < 7:151694/139‑1 CAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTGGCGATAGGGTCGGGCCTGATGGAGCCGCTAGGGGCGGTGATCGGG > 8:151694/1‑139 GTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGACTTTCTAACCTGAAGGCCGCGTTGGTGGCGATAGGGTCGGGCCTGATGGAGCCGCTAGGGGCGGTGATCGGGCT < 5:188101/139‑1 GTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGACTTTCTAACCTGAAGGCCGCGTTGGTGGCGATAGGGTCGGGCCTGATGGAGCCGCTAGGGGCGGTGATCGGGCT > 6:188101/1‑139 CATCGCCATCCAGGACATCCCCGAGGGGCTGCGCTTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTGGCGATAGGGTCGGGCCTGATGGAGCCGCTAGGTGCGGTGATCGGGCTGGGGATTTCTACCG < 4:309928/149‑1 ATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTGGCGATAGGGTCGGGCCTGATGGAGCCGCTAGGGGCGGTGATCGGGC < 5:301729/133‑1 ATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTGGCGATAGGGTCGGGCCTGATGGAGACGCTAGGGGCGGTGATCGGGC > 6:301729/1‑133 TAGGCGAGGGCAAAGCCGGTAGAAATCCCCAGCCCGATCACCGCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2059847‑2059976‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagtgccaTCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTGGCGATAGGGTCGGGCCTGATGGAGCCGCTAGGGGCGGTGATCGGGCTGGGGATTTCTACCG < NC_002947/2060009‑2059863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |