New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2279749 =	104 (1.970)	7 (0.140)	7/240	NT	6.8%	coding (889/2082 nt)	fadH	2,4‑dienoyl‑CoA reductase
	?	NC_002947	2279775 =	94 (1.880)					coding (915/2082 nt)	fadH	2,4‑dienoyl‑CoA reductase

TCCGCACGACCGGCAGCGGCCTTGTTGACGAAGTCCGGGTCGGCGAGAAACGGTCGCGCCATCGAGACCATGTCCGCATCGCCCTCGGCCAGCACTGCCTCGGCCACTTCCGGGGTGTTGATGCGGTTGGTGGTGATCAGCGGAATGCTCACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2279903‑2279749 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccacCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCGGACTTCGTCAACAAGGCCGCTGCCGGTCGTGCGGATGAAATCAACACCTGCATC  >  NC_002947/2279775‑2279922                                                                                                                                                                                                                                                                                                                 TCCGCACGACCGGCAGCGGCCTTGTTGACGAAGTCCGGGTCGGCGAGAAACGGTCGCGCCATCGAGACCATGTCCGCATCGCCCTCGGCCAGCACTGCCTCGGCCACTTCCGGGGTGTTGATGCGGTTGGTGGTGATCAGCGGAATGCT                                                                                                                                                            >  3:118701/1‑149   CGCACGACCGGCAGCGGCCTTGTTGACGAAGTCCGGGTCGGCGAGAAACGGTCGCGCCATCGAGACCATGTCCGCATCGCCCTCGGCCAGCACTGCCTCGGCCACTTCCGGGGTGTTGATGCGGTTGGTGGTGATCAGCGGAATGCTCA                                                                                                                                                          <  7:233777/149‑1     CACGACCGGCAGCGGCCTTGTTGACGAAGTCCGGGTCGGCGAGAAACGGTCGCGCCATCGAGACCATGTCCGCATCGCCCTCGGCCAGCACTGCCTCGGCCACTTCCGGGGTGTTGATGCGGTTGGTGGTGATCAGCGGAATGCTCACC                                                                                                                                                        <  4:322614/149‑1                        GTTGACGAAGTCCGGGTCGGCGAGAAACGGTCGCGCCATCGAGACCATGTCCGCATCGCCCTCGGCCAGCACTGCCTCGGCCACTTCCGGGGTGTTGATGCGGTTGGTGGTGATCAGCGGAATGCTCAC                                                                                                                                                         <  5:185388/129‑1                        GTTGACGAAGTCCGGGTCGGCGAGAAACGGTCGCGCCATCGAGACCATGTCCGCATCGCCCTCGGCCAGCACTGCCTCGGCCACTTCCGGGGTGTTGATGCGGTTGGTGGTGATCAGCGGAATGCTCAC                                                                                                                                                         >  6:185388/1‑129                                                                                                                             GGTTGGTGGTGATCAGCGGAATGCTCACCACCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATG                                                                                >  8:289746/1‑101                                                                                                                             GGTTGGTGGTGATCAGCGGAATGCTCACCACCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATG                                                                                <  7:289746/101‑1                                                                                                                              GTTGGTGGTGATCAGCGGAATGCTCACCACCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCG                                                        >  3:325122/1‑124                                                                                                                              GTTGGTGGTGATCAGCGGAATGCTCACCACCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCG                                                        <  4:325122/124‑1                                                                                                                               TTGGTGGTGATCAGCGGAATGCTCACCACCAACCGTATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCGGACTTCGTCAACAAGGCCGCTGCCGG                              >  6:294518/1‑149                                                                                                                                 GGTGGTGATCAGCGGAATGCTCACCACCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGA                                                                                  >  8:73449/1‑95                                                                                                                                 GGTGGTGATCAGCGGAATGCTCACCACCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGA                                                                                  <  7:73449/95‑1                                                                                                                                                       ACCACCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTGGCCGACCCGGACTTCGTCAACAAGGCCGCTGCCGGTCGTGCGGATGAAATCAACACCT       <  1:101029/148‑1                                                                                                                                                       ACCACCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCGGACTTCGTCAACAAGGCCGCTGCCGGTCGTGCGGATGAAATCAACACCT       <  6:259958/148‑1                                                                                                                                                          ACCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCG                                                                           <  6:314730/77‑1                                                                                                                                                           CCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCGGACTGCGTCACCAAGGCCGCTGCCGGTCGTGCGGATGAAATCAACACCTGCAgc  >  6:5118/1‑147                                                                                                                                                           CCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCGGAC                                                     >  4:40214/1‑98                                                                                                                                                           CCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCGGAC                                                     <  3:40214/98‑1                                                                                                                                                                                                                                                                                                                 TCCGCACGACCGGCAGCGGCCTTGTTGACGAAGTCCGGGTCGGCGAGAAACGGTCGCGCCATCGAGACCATGTCCGCATCGCCCTCGGCCAGCACTGCCTCGGCCACTTCCGGGGTGTTGATGCGGTTGGTGGTGATCAGCGGAATGCTCACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2279903‑2279749 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccacCAACCGCATCAACACCCCGGAAGTGGCCGAGGCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCGGACTTCGTCAACAAGGCCGCTGCCGGTCGTGCGGATGAAATCAACACCTGCATC  >  NC_002947/2279775‑2279922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.