New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2286259 =	95 (1.800)	6 (0.120)	5/242	NT	5.9%	coding (544/888 nt)	PP_2014	membrane protein
	?	NC_002947	2286336 =	100 (1.990)					coding (621/888 nt)	PP_2014	membrane protein

AGGCGCCAGCCACTGGTACAGCCAGATATGCCCGAGCAGGCCGTACAGCACGCCGGACAGGCCGCCAAACAGGCTCGGCCCGCTGGTGTAGTGCTGGGCCAGGTTGGAGACCAGGCTGAACAGCAGGGTCAGGCCCAGCA‑‑ACGCCCACGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2286411‑2286259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggccGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAACCTGCCCAAGGGCGTGCTGGTGATGATGCTGATCTGGCTGGTGGTATGCCTGA  >  NC_002947/2286336‑2286478                                                                                                                                                                                                                                                                                                            AGGCGCCAGCCACTGGTACAGCCAGATATGCCCGAGCAGGCCGTACAGCACGCCGGACAGGCCGCCAAACAGGCTCGGCCCGCTGGTGTAGTGCTGGGCCAGGTTGGAGACCAGGCTGAACAGCAGGGTCAGGCCCAGCA‑‑ACGCCCAC                                                                                                                                                      <  2:242617/148‑1                                                                             GGCCCGCTGGTGTAGTGCTGGGCCAGGTTGGAGACCAGGCTGAACAGCAGGGTCAGGCCCAGCA‑‑ACGCCCACGGGCCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGC                                                                         >  4:201117/1‑149                                                                                     GGTGTAGTGCTGGGCCAGGTTGGAGACCAGGCTGAACAGCAGGGTCAGGCCCAGCACTACACCAGCGGGCCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGA                                                                   >  7:56007/1‑149                                                                                                 GGCCAGGTTGGAGACCAGGCTGAACAGCAGGGTCAGGCCCAGCA‑‑ACGCCCACGGGCCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAAC                                                      <  3:201117/148‑1                                                                                                  GCCAGGTTGGAGACCAGGCTGAACAGCAGGGTCAGGCCCAGCACTACACCAGCGGGCCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAAC                                                      <  8:56007/149‑1                                                                                                  GCCAGGTTGGAGACCAGGCTGAACAGCAGGGTCAGGCCCAGCA‑‑ACGCCCACGGGCCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAACCT                                                    >  5:118365/1‑149                                                                                                                                GTCAGGCCCAGCA‑‑ACGCCCACGGGCCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAACCTGCCCAAGGGCGTGCTGGTGATGATGCTGAT                      <  6:118365/149‑1                                                                                                                                                      CGGGCCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAACCTGCCCAAGGGCGTGCTGGTGATGATGCTGATCTGGCTGGTGGTATGCCTGA  <  4:95240/149‑1                                                                                                                                                         GCCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAACCTGCCCAAGGGCGTGCTGGTGATGATGCTGATCTGGCTGGTG            <  7:320762/136‑1                                                                                                                                                         GCCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAACCTGCCCAAGGGCGTGCTGGTGATGATGCTGATCTGGCTGGTG            >  8:320762/1‑136                                                                                                                                                          CCGATCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAACCTGCCCAAGGGCGTGCTTGTGATGATGCTGATCTGGCTGGTt            <  1:64021/135‑2                                                                                                                                                          CCGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAACCTGCCCAAGGGCGTGCTGGTGATGATGATGATCTGGCTGGTG            >  2:64021/1‑135                                                                                                                                                                                                                                                                                                            AGGCGCCAGCCACTGGTACAGCCAGATATGCCCGAGCAGGCCGTACAGCACGCCGGACAGGCCGCCAAACAGGCTCGGCCCGCTGGTGTAGTGCTGGGCCAGGTTGGAGACCAGGCTGAACAGCAGGGTCAGGCCCAGCA‑‑ACGCCCACGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2286411‑2286259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggccGAGCCTGTTTGGCGGCCTGTCCGGCGTGCTGTACGGCCTGCTCGGGCATATCTGGCTGTACCAGTGGCTGGCGCCTGACCGTTACTTCAACCTGCCCAAGGGCGTGCTGGTGATGATGCTGATCTGGCTGGTGGTATGCCTGA  >  NC_002947/2286336‑2286478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.