| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2303120 = | 105 (1.990) | 7 (0.150) | 6/230 | NT | 8.1% | intergenic (‑205/+90) | PP_mr30/PP_2027 | C4 ncRNA/hypothetical protein |
| ? | NC_002947 | 2303178 = | 64 (1.340) | intergenic (‑263/+32) | PP_mr30/PP_2027 | C4 ncRNA/hypothetical protein | |||||
CGCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2303277‑2303120‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggagcgggcATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAATACTGC > NC_002947/2303178‑2303324 cgtCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTG < 1:3114/146‑1CGCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTG < 2:273691/149‑1CGCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT > 4:99603/1‑148CGCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT < 4:13388/148‑1CGCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT < 3:99603/148‑1 GCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG < 8:263339/149‑1 GCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG < 2:324692/149‑1 GCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG < 2:329862/149‑1 CAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG > 6:306156/1‑147 GCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCCTGCGCCGTACCTGTGGGAGC < 1:273496/149‑1 AGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGG < 2:317723/147‑1 CGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGG > 2:7230/1‑132 GCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCG < 2:182751/110‑1 GCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCG > 1:182751/1‑110 CGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAG > 7:26831/1‑149 CCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCA > 2:165288/1‑132 CCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCCCGAAGAGGCCCGCACAGGCAACCACATACTTGCGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGCCACCAACACCTGCTCACCTGGC > 4:143649/1‑149 TGACCTCGTACGCCTAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAA < 3:143649/149‑1 ACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAAT < 8:26831/148‑1 GTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTG > 7:327842/1‑149 TGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGC > 3:288578/1‑149 TGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGC > 7:248936/1‑149 TGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGC > 8:210990/1‑149 GAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAA < 8:93965/149‑1 AGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAAT < 3:238871/149‑1 GCATGCCCGCGAAGAGGCCCGCTCAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTTCCAATACTGC < 4:288578/149‑1 CGCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2303277‑2303120‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggagcgggcATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAATACTGC > NC_002947/2303178‑2303324 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |