New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 230417082 (1.550)6 (0.120) 5/238 NT 7.2% coding (672/1632 nt) PP_2027 hypothetical protein
?NC_002947 = 2304196 79 (1.600)coding (646/1632 nt) PP_2027 hypothetical protein

GCTCTTCCAGGGTCAGGCTGCTGGCTGGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2304016‑2304170
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgctgACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGGCAGCCTGGCCGGCTGGCTTGCCG  <  NC_002947/2304196‑2304050
                                                                                                                                                                                                                                                                                                              
GCTCTTCCAGGGTCAGGCTGCTGGCTGGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCG                                                                                                                                                           >  6:117987/1‑149
  TCTTCCAGGGTCAGGCTGCTGGCTGGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTC                                                                                                                                                         >  3:105834/1‑149
    TTCCAGGGTCAGGCTGCTGGCTGGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGC                                                                                                                                                       >  7:170487/1‑149
      CCAGGGTCAGGCTGCTGGCTGGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGCTG                                                                                                                                                     >  6:44568/1‑149
      CCAGGGTCAGGCTGCTGGCTGGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCG                                                                                                                                                        <  3:343772/146‑1
                GCTGCTGGCTGGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCG                                                                                                                                                        <  7:82286/136‑1
                GCTGCTGGCTGGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCG                                                                                                                                                        >  8:82286/1‑136
                          GGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGCTGACGTTCACCGCCACGGCAGC                                                                                                                                 >  1:182495/1‑149
                             AACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTC                                                                                                                                                         <  1:876/122‑1
                             AACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTC                                                                                                                                                         >  2:876/1‑122
                                          CAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGCTGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAA                                                                                                                 <  1:74478/149‑1
                                             CCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGCTGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCA                                                                                                              <  5:117987/149‑1
                                             CCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGCTGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCA                                                                                                              <  2:182495/149‑1
                                                     GCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTC                                                                                                                                                            <  2:62481/95‑1
                                                     GCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTC                                                                                                                                                            >  1:62481/1‑95
                                                                 GGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGCTGACGTTCACCGCCACGGCAGCTGCCAGCAGCG                                                                                                                      >  5:154728/1‑121
                                                                 GGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGCTGACGTTCACCGCCACGGCAGCTGCCAGCAGCG                                                                                                                      <  6:154728/121‑1
                                                                                                                                                     TCGCTGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGGCAGCCTGGCCGGCaagcca      <  5:338905/149‑7
                                                                                                                                                       GCTGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGGCAGCCTGGCCGGCTGGCT       >  7:9331/1‑146
                                                                                                                                                       GCTGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGGCAGCCTGGCCGGCTGGCT       <  8:9331/146‑1
                                                                                                                                                        CTGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGCCAGCCGGCCAGGCTGccggaat   <  6:141308/149‑8
                                                                                                                                                         TGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGGCAGCCTGGCCGGCTGGCTTGCCG  >  5:315091/1‑149
                                                                                                                                                         TGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGGCAGCCTGGCCGGCTGGCTTGCCG  >  7:105530/1‑149
                                                                                                                                                         TGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGGCAGCCTGGCCGGCTGGCTTG     >  2:270161/1‑146
                                                                                                                                                         TGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGGCAGCCTGGCCGGCTGGCTTG     <  1:270161/146‑1
                                                                                                                                                         TGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAAT                                                                                                  <  7:177102/53‑1
                                                                                                                                                         TGACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAAT                                                                                                  >  8:177102/1‑53
                                                                                                                                                                                                                                                                                                              
GCTCTTCCAGGGTCAGGCTGCTGGCTGGCAACCACGGCAAGCCAGCCGGCCAGGCTGCCGGAATCGGCCGTACCGTGAGGCGCAAGGGCAGCGAGCTGACCTGCACCTGGTGGCCGGCGCGGGCCGTGCCATTGGCCTGCGCTGCTTCGTCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2304016‑2304170
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgctgACGTTCACCGCCACGGCAGCTGCCAGCAGCGACGAAGCAGCGCAGGCCAATGGCACGGCCCGCGCCGGCCACCAGGTGCAGGTCAGCTCGCTGCCCTTGCGCCTCACGGTACGGCCGATTCCGGCAGCCTGGCCGGCTGGCTTGCCG  <  NC_002947/2304196‑2304050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.