| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2374238 | 91 (1.720) | 5 (0.100) | 4/244 | NT | 5.3% | coding (1069/2376 nt) | ppsA | phosphoenolpyruvate synthetase |
| ? | NC_002947 | = 2374257 | 90 (1.770) | coding (1088/2376 nt) | ppsA | phosphoenolpyruvate synthetase | |||||
CTACCAGCGCCCGATGGACATCGAGTGGGCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2374090‑2374238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCCAATGGCACGGCCTTCGACCAGCACGGTGCCTTTCTCTTTGAGCAGGTAGCGTTCCATGACGTTGGCGCTGGAACGGCTCTTCACCGTCTCAGGGCGGGCCTGGACGATGTACAGCTTGCCGTCGTCACCGTCCTTGGCCCACTCGA < NC_002947/2374257‑2374110 CTACCAGCGCCCGATGGACATCGAGTGGGCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGG < 3:227720/149‑1CTACCAGCGCCCGATGGACATCGAGTGGGCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGG > 5:123271/1‑149 CCCGATGGACATCGAGTGGGCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGG > 3:54812/1‑140 CCCGATGGACATCGAGTGGGCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGG < 4:54812/140‑1 CCCGATGGACATCGAGTGGGCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGG > 7:251961/1‑140 CCCGATGGACATCGAGTGGGCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGG < 8:251961/140‑1 ATCGAGTGGGCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGGCCAATGGCACGGCCTTCGA > 5:6261/1‑149 GCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGGCCAATGGCACGGCCTTCGACCAGCACGG < 6:6261/149‑1 CAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGGCCAATGGCACGGCCTTCGACCAGCACGG < 1:250544/129‑1 CAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGGCCAATGGCACGGCCTTCGACCAGCACGG > 2:250544/1‑129 AAAGAGAAAGGCACCGTGCTGGTCGAAGGCCGTGCCATTGGCCAGCACGGTGCCTTTCTCTTTGAGCAGGTAGCGTTCCATGACGTTGGCGCTGGAACGGCTCTTCACC < 6:349866/109‑1 GCTGGCCAATGGCACGGCCTTCGACCAGCACGGTGCCTTTCTCTTTGAGCAGGTAGCGTTCCATGACGTTGGCGCTGGAACGGCTCTTCACCGTCTCAGGG > 7:83413/1‑101 GCTGGCCAATGGCACGGCCTTCGACCAGCACGGTGCCTTTCTCTTTGAGCAGGTAGCGTTCCATGACGTTGGCGCTGGAACGGCTCTTCACCGTCTCAGGG < 8:83413/101‑1 CTGGCCAATGGCACGGCCTTCGACCAGCACGGTGCCTTTCTCTTTGAGCAGGTAGCGTTCCATGACGTTGGCGCTGGAACGGCTCTTCACCGTCTCAGGGCGGGCCTGGACGATGTACAGCTTGCCGTCGTCACCGTCCTTGGCCCACT > 2:78947/1‑149 TGGCCAATGGCACGGCCTTCGACCAGCACGGTGCCTTTCTCTTTGAGCAGGTAGCGTTCCATGACGTTGGCGCTGGAACGGCTCTTCACCGTCTCAGGGCGGGCCTGGACGATGTACAGCTTGCCGTCGTCACCGTCCTTGGCCCACTC > 6:123271/1‑149 GCCAATGGCACGGCCTTCGACCAGCACGGTGCCTTTCTCTTTGAGCAGGTAGCGTTCCATGACGTTGGCGCTGGAACGGCTCTTCACCGTCTCAGGGCGGGCCTGGACGATGTACAGCTTGCCGTCGTCACCGTCCTTGGCCCACTCGA > 8:157813/1‑149 CTACCAGCGCCCGATGGACATCGAGTGGGCCAAGGACGGTGACGACGGCAAGCTGTACATCGTCCAGGCCCGCCCTGAGACGGTGAAGAGCCGTTCCAGCGCCAACGTCATGGAACGCTACCTGCTCAAAGAGAAAGGCACCGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2374090‑2374238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCCAATGGCACGGCCTTCGACCAGCACGGTGCCTTTCTCTTTGAGCAGGTAGCGTTCCATGACGTTGGCGCTGGAACGGCTCTTCACCGTCTCAGGGCGGGCCTGGACGATGTACAGCTTGCCGTCGTCACCGTCCTTGGCCCACTCGA < NC_002947/2374257‑2374110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |