| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2407945 = | 111 (2.100) | 7 (0.140) | 6/246 | NT | 6.3% | coding (620/1566 nt) | PP_2111 | aerotaxis receptor |
| ? | NC_002947 | 2408003 = | 99 (1.940) | coding (562/1566 nt) | PP_2111 | aerotaxis receptor | |||||
ATCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2408096‑2407945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGGATGAACGGGAGCCAGTCCTGCAGCACTGGCAGCCACTTGTCGCGACGCGGTACC > NC_002947/2408003‑2408148 ATCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGA < 4:309256/149‑1ATCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGA < 7:12405/149‑1 CCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAG > 8:143630/1‑148 CCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAG > 3:89126/1‑148 CTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGC > 7:45502/1‑148 CTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGC < 7:143630/148‑1 TGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCA > 4:59724/1‑148 TCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGC < 5:149615/107‑1 TCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGC > 6:149615/1‑107 CTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGGA > 4:149793/1‑149 CTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAA < 2:177780/87‑1 CTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGAATGCTGCGCCTGGACGAGCAGACCCAGTGGTACAGAAAGCCCTGCGGCCAA > 1:177780/1‑87 GGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGGAT < 3:149793/147‑1 CCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCA > 7:195730/1‑141 CCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCA < 8:195730/141‑1 AGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGGATGAACGGGAGCCAGTCCTG > 4:17051/1‑149 GCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGGATGAACGGGAGCCAGTCCTGCAGCACTGGCAGCCACTTGTCGCGACGCGGTACC < 8:172300/149‑1 ATCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2408096‑2407945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGGATGAACGGGAGCCAGTCCTGCAGCACTGGCAGCCACTTGTCGCGACGCGGTACC > NC_002947/2408003‑2408148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |