| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2480384 = | 121 (2.290) | 8 (0.160) | 7/242 | NT | 7.0% | coding (177/393 nt) | PP_2174 | hypothetical protein |
| ? | NC_002947 | 2480429 = | 96 (1.910) | coding (132/393 nt) | PP_2174 | hypothetical protein | |||||
TGCTTGTGCGCAGCCGTCTCTTACCTGCTACTCACCCCACCCAAGGCAGTGAGCCACTGCCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2480536‑2480384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTGCAG > NC_002947/2480429‑2480576 TGCTTGTGCGCAGCCGTCTCTTACCTGCTACTCACCCCACCCAAGGCAGTGAGCCACTGCCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGC > 5:141355/1‑149 GTGCGCAGCCGTCTCTTACCTGCTACTCACCCCACCCAAGGCAGTGAGCCACTGCCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCTGC < 6:337178/147‑1 CCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCT > 6:126477/1‑91 CCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCT < 5:126477/91‑1 TACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCTGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAG < 3:8693/132‑1 TACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCTGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAG > 4:8693/1‑132 TACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCTGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGG < 6:208473/116‑1 TACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCTGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGG > 5:208473/1‑116 CAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCTGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAA < 5:117217/131‑1 CAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCTGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCAGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAA > 6:117217/1‑131 ATTCCGCGCAGCATGCTGCGAATACTGCGCGGAATGCTGCCGTACGAAGCGAATGCGGTGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGT > 4:252214/1‑94 ATTCCGCGCAGCATGCTGCGAATACTGCGCGGAATGCTGCCGTACGAAGCGAATGCGGTGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGT < 3:252214/94‑1 TGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTG > 6:67303/1‑149 TGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTG > 8:402/1‑149 TGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTG > 5:8470/1‑149 TGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTG > 4:140891/1‑149 TGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGT > 3:39142/1‑148 TGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCT > 8:176217/1‑131 GCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTG > 4:323735/1‑148 CCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTGCA < 7:45948/149‑1 CCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTG > 8:45948/1‑147 CCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGT < 4:39142/146‑1 CGTTCGAAGCGAATGCGGCGCCGAGACTTTTGAGGCACTGTCTTCAGTGGCAGTGGCTCTCTGCCTTTGGTGGGGGGAGTATAAGCTTTGAGACGGCTGCGCTCAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTGCAG < 7:191612/149‑1 TGCTTGTGCGCAGCCGTCTCTTACCTGCTACTCACCCCACCCAAGGCAGTGAGCCACTGCCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGG‑‑CGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2480536‑2480384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTGCAG > NC_002947/2480429‑2480576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |