| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2675457 | 49 (0.930) | 3 (0.060) | 3/234 | NT | 5.6% | coding (678/1080 nt) | PP_2344 | hypothetical protein |
| ? | NC_002947 | = 2675485 | 56 (1.150) | coding (650/1080 nt) | PP_2344 | hypothetical protein | |||||
GGTACAGCACCAGGTCGTCGCCGCGATAGGGCAGGTCGAGGTGATAGTCGAGCAGGCCGCCGTCGCGGTAGGTGCCGGCGCCGGCACCGGGGATGTCTTTCACGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2675348‑2675457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgccctgcTCGCTTCCGGGTCGATACCGATGGTCATGCAGGGCGTGAAAGACATCCCCGGTGCCGGCGCCGGCACCTACCGCGACGGCGGCCTGCTCGACTATCACCTCGACCTGCCCTATCGCGGCGACGACCTGGTGCTGTACCCGCACTT < NC_002947/2675485‑2675341 GGTACAGCACCAGGTCGTCGCCGCGATAGGGCAGGTCGAGGTGATAGTCGAGCAGGCCGCCGTCGCGGTAGGTGCCGGCGCCGGCACCGGGGATGTCTTTCACGCCCTGCTCGCTTCCGGGTCGATACCGATGGTCATGCAGGGCGTGA < 6:135224/149‑1 CGCCGCGATAGGGCAGGTCGAGGTGATAGTCGAGCAGGCCGCCGTCGCGGTAGGTGCCGGCGCCGGCACCGGGGATGTCTTTC < 1:106284/83‑1 CGCCGCGATAGGGCAGGTCGAGGTGATAGTCGAGCAGGCCGCCGTCGCGGTAGGTGCCGGCGCCGGCACCGGGGATGTCTTTC > 2:106284/1‑83 GGTGATAGTCGAGCAGGCCGCCGTCGCGGTAGGTGCCGGCGCCGGCACCGGGGATGTCTTTCACGCCCTGCTCGCTTCCGGGTCGATACCGATGGTCATGCAGGGCGTGAAA < 3:280104/112‑1 GGTGATAGTCGAGCAGGCCGCCGTCGCGGTAGGTGCCGGCGCCGGCACCGGGGATGTCTTTCACGCCCTGCTCGCTTCCGGGTCGATACCGATGGTCATGCAGGGCGTGAAA > 4:280104/1‑112 ACGCCCTGCTCGCTTCCGGGTCGATACCGATGGTCATGCAGGGCGTGAAAGACATCCCCGGTGCCGGCGCCGGCACCTACCGCGACGGCGGCCTGCTCGACTATCACCTCGACCTGCCCTATCGCGGCGACGACCTGGTGCTGTACCCG > 4:262085/1‑149 CCCTGCTCGCTTCCGGGTCGATACCGATGGTCATGCAGGGCGTGAAAGACATCCCCGGTGCCGGCGCCGGCACCTACCGCGACGGCGGCCTGCTCGACTATCACCTCGACCTGCCCTATCGCGGCGACGACCTGGTGCTGTACCCGCAC < 7:251374/149‑1 TGCTCGCTTCCGGGTCGATACCGATGGTCATGCAGGGCGTGAAAGACATCCCCGGTGCCGGCGCCGGCACCTACCGCGACGGCGGCCTGCTCGACTATCACCTCGACCTGCCCTATCGCGGCGCCGACCAGGTGCATTACCCCCACTT > 8:282628/1‑148 GGTACAGCACCAGGTCGTCGCCGCGATAGGGCAGGTCGAGGTGATAGTCGAGCAGGCCGCCGTCGCGGTAGGTGCCGGCGCCGGCACCGGGGATGTCTTTCACGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2675348‑2675457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgccctgcTCGCTTCCGGGTCGATACCGATGGTCATGCAGGGCGTGAAAGACATCCCCGGTGCCGGCGCCGGCACCTACCGCGACGGCGGCCTGCTCGACTATCACCTCGACCTGCCCTATCGCGGCGACGACCTGGTGCTGTACCCGCACTT < NC_002947/2675485‑2675341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |