| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2759788 = | 69 (1.310) | 5 (0.100) | 5/248 | NT | 8.0% | coding (1155/1635 nt) | PP_2413 | GGDEF domain‑containing protein |
| ? | NC_002947 | 2759857 = | 47 (0.910) | coding (1086/1635 nt) | PP_2413 | GGDEF domain‑containing protein | |||||
TGGAAACTCGCCGCCGGTGCCCGCACGATGGACCGCGCCGGTACCGCCGAGCATTTGCATCAGGTGCGGGCCTGGTACTTCGAGGCGGCCGAGCTCAAGCGCGCGTTGCTGTTCAGCCTGAACTTGCTGCAAGAGCGTATCGGCCGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2759937‑2759788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcGAAGTACCAGGCCCGCACCTGATGCAAATGCTCGGCGGTACCGGCGCGGTCCATCGTGCGGGCACCGGCGGCGAGTTTCCACAGCGGGCGGGCGATGGTACGGGCCAGCCACCACAGCAGCAGGCTGCCAACCAGCGCCAAGGGCGCC > NC_002947/2759857‑2760004 TGGAAACTCGCCGCCGGTGCCCGCACGATGGACCGCGCCGGTACCGCCGAGCATTTGCATCAGGTGCGGGCCTGGTACTTCGAGGCGGCCGAGCTCAAGCGCGCGTTGCTGTTCAGCCTGAACTTGCTGCAAGAGCGTATCGGCCGGCT > 3:131102/1‑149 GAAACTCGCCGCCGGTGCCCGCACGATGGACCGCGCCGGTACCGCCGAGCATTTGCATCAGGTGCGGGCCTGGTACTTCGAGGCGGCCGAGCTCAAGCGCGCGTTGCTGTTCAGCCTGAACTTGCTGCAAGAGCGTATCGGCCGGCTC > 8:117697/1‑148 GAGGCGGCCGAGCTCAAGCGCGCGTTGCTGTTCAGCCTGAACTTGCTGCAAGAGCGTATCGGCCGGCTCGAAGTACCAGGACCGCACCTGATGCAAATGCTCGGCGGTACCGGCGCGGTCCATCGTGCGGGCACCGGCGGCGAGTTTC > 8:4787/1‑148 AGGCGGCCGAGCTCAAGCGCGCGTTGCTGTTCAGCCTGAACTTGCTGCAAGAGCGTATCGGCCGGCTCGAAGTACCAGGCCCGCACCTGATGCAAATGCTCGGCGGTACCGGCGCGGTCCATCGTGCGGGCACCGGCGGCGAGTTTCCA > 6:291698/1‑149 TTGCTGTTCAGCCTGAACTTGCTGCAAGAGCGTATCGGCCGGCTCGAAGTACCAGGCCCGCACCTGATGCAAATGCTCGGCGGTACCGGCGCGGTCCATCGTGCGGGCACCGGCGGCGAGTTTCCACAGCGGGCGGGCGATGGAACGGG < 7:4787/149‑1 GCGTATCGGCCGCCTCGAAGTACCAGGCCCGCACCTGATGCAAATGCTCGGCGGTACCGGCGCGGTCCATCGTGCGGGCACCGGCGGCGAGTT < 7:230815/93‑1 GCGTATCGGCCGACTCGAAGTACCAGGCCCGCACCTGATGCAAATGCTCGGCGGTACCGGCGCGGTCCATCGTGCGGGCACCGGCGGCGAGTT > 8:230815/1‑93 CTCGAAGTACCAGGCCCGCACCTGATGCAAATGCTCGGCGGTACCGGCGCGGTCCATCGTGCGGGCACCGGCGGCGAGTTTCCACAGCGGGCGGGCGATGGTACGGGCCAGCCACCACAGCAGCAGGCTGCCAACCAGCGCCAAGGGCG > 7:138520/1‑149 CGAAGTACCAGGCCCGCACCTGATGCAAATGCTCGGCGGTACCGGCGCGGTCCATCGTGCGGGCACCGGCGGCGAGTTTCCACAGCGGGCGGGCGATGGTACGGGCCAGCCACCACAGCAACAGGCTGCCAACCAGCGCCAAGGGCGCC > 4:344764/1‑149 TGGAAACTCGCCGCCGGTGCCCGCACGATGGACCGCGCCGGTACCGCCGAGCATTTGCATCAGGTGCGGGCCTGGTACTTCGAGGCGGCCGAGCTCAAGCGCGCGTTGCTGTTCAGCCTGAACTTGCTGCAAGAGCGTATCGGCCGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2759937‑2759788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcGAAGTACCAGGCCCGCACCTGATGCAAATGCTCGGCGGTACCGGCGCGGTCCATCGTGCGGGCACCGGCGGCGAGTTTCCACAGCGGGCGGGCGATGGTACGGGCCAGCCACCACAGCAGCAGGCTGCCAACCAGCGCCAAGGGCGCC > NC_002947/2759857‑2760004 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |