| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2963491 | 49 (0.930) | 4 (0.080) | 3/244 | NT | 7.4% | coding (441/942 nt) | PP_2593 | ferric siderophore ABC transporter permease |
| ? | NC_002947 | = 2963537 | 53 (1.040) | coding (395/942 nt) | PP_2593 | ferric siderophore ABC transporter permease | |||||
TCCAGCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2963342‑2963491‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCCGTGC < NC_002947/2963537‑2963391 TCCAGCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTG > 1:21230/1‑149 CCAGCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTG > 2:11355/1‑148 ACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTCGTCGGCCTGGTGCTGACCATGGTCATGGCCACGT > 2:238237/1‑149 GAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAA < 1:238237/149‑1 CGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAA < 5:333339/122‑1 CGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAA > 6:333339/1‑122 CTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCCGT > 3:217868/1‑149 CTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCCGT > 8:171685/1‑149 CTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGC > 2:69737/1‑133 TGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCC > 7:225487/1‑124 TGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCC < 8:225487/124‑1 GGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCCGTGC > 2:21230/1‑149 TCCAGCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2963342‑2963491‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCCGTGC < NC_002947/2963537‑2963391 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |