| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3010001 = | 62 (1.170) | 3 (0.060) | 3/240 | NT | 5.1% | intergenic (‑907/‑761) | PP_2628/PP_2631 | ABC transporter ATP‑binding protein/cellulose biosynthesis protein BcsF/YhjT |
| ? | NC_002947 | 3010043 = | 54 (1.080) | intergenic (‑949/‑719) | PP_2628/PP_2631 | ABC transporter ATP‑binding protein/cellulose biosynthesis protein BcsF/YhjT | |||||
ACGCAGGGTCGACGCCATTTCGCGCACGACCAGCTTCAAGGCGTTGCCACGCGACTGCCGCAGGTGGTGCAGCTGGCGCGCCAGGCTATCCAGACGCTGCCCACCGTCCATGGCAAAGATCACCGTGGCAGACACCGCACGGCTGGCTTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3010153‑3010001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttgccATGGACGGTGGGCAGCGTCTGGATAGCCTGGCGCGCCAGCTGCACCACCTGCGGCAGTCGCGTGGCAACGCCTTGAAGCTGGTCGTGCGCGAAATGGCGTCGACCCTGCGTTATCAAGACGAACAGTTGCTGCTGGCTTGTGGTG > NC_002947/3010043‑3010187 ACGCAGGGTCGACGCCATTTCGCGCACGACCAGCTTCAAGGCGTTGCCACGCGACTGCCGCAGGTGGTGCAGCTGGCGCGCCAGGCTATCCAGACGCTGCCCACCGTCCATGGCAATGATCACCGTGGCAGACACCGCACGGCTGGCTT > 6:57764/1‑149 AGGGTCGACGCCATTTCGCGCACGACCAGCTTCAAGGCGTTGCCACGCGACTGCCGCAGGTGGTGCAGCTGGCGCGCCAGGCTATCCAGACGCTGCCCACCGTCCATGGCAAAGATCACCGTGGCAGACACCGCACGGCTGGCTTTGCC < 7:13518/149‑1 GACCAGCTTCAAGGCGTTGCCACGCGACTGCCGCAGGTGGTGCAGCTGGCGCGCCAGGCTATCCAGACGCTGCCCACCGTCCATGGCAAAGATCACCGTGGCAGACACCGCACGGCTGGCTTTG < 6:82633/124‑1 TGGCAAAGATCACCGTGGCAGACACCGCACGGCTGGCTTTGCCATGGACGGTGGGCAGCGTCTGGATAGCCTGGCGCGCCAGCTGCACCACCTGCGGCAGTCGCGTGGCAACGCCTTGAAGCTGGTCGTGCGCGAAATGGCGTCGACCC > 6:320205/1‑149 GGCAAAGATCACCGTGGCAGACACCGCACGGCTGGCTTTGCCATGGACGGTGGGCAGCGTCTGGATAGCCTGGCGCGCCAGCTGCACCACCTGCGGCAGTCGCGTGGCAACGCCTTGAAGCTGGTCGTGCGCGAAATGGCGT < 3:263855/142‑1 GGCAAAGATCACCGTGGCAGACACCGCACGGCTGGCTTTGCCATGGACGGTGGGCAGCGTCTGGATAGCCTGGCGCGCCAGCTGCACCACCTGCGGCAGTCGCGTGGCAACGCCTTGAAGCTGGTCGTGCGCGAAATGGCGT > 4:263855/1‑142 TGCCATGGACGGTGGGCAGCGTCTGGATAGCCTGGCGCGCCAGCTGCACCACCTGCGGCAGTCGCGTGGCAACGCCTTGAAGCTGGTCGTGCGCGAAATGGCGTCGACCCTGCGTTATCAAGACGAACAGTTGCTGCTGGCTTGTGGT < 8:294725/148‑1 GCCATGGACGGTGGGCAGCGTCTGGATAGCCTGGCGCGCCAGCTGCACCACCTGCGGCAGTCGCGTGGCAACGCCTTGAAGCTGGTCGTGCGCGAAATGGCGTCGACCCTGCGTTATCAAGACGAACAGTTGCTGCTGGCTagatcgg > 3:212715/1‑141 GCCATGGACGGTGGGCAGCGTCTGGATAGCCTGGCGCGCCAGCTGCACCACCTGCGGCAGTCGCGTGGCAACGCCTTGAAGCTGGTCGTGCGCGAAATGGCGTCGACCCTGCGTTATCAAGACGAACAGTTGCTGCTGGC < 4:212715/140‑1 ACGCAGGGTCGACGCCATTTCGCGCACGACCAGCTTCAAGGCGTTGCCACGCGACTGCCGCAGGTGGTGCAGCTGGCGCGCCAGGCTATCCAGACGCTGCCCACCGTCCATGGCAAAGATCACCGTGGCAGACACCGCACGGCTGGCTTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3010153‑3010001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttgccATGGACGGTGGGCAGCGTCTGGATAGCCTGGCGCGCCAGCTGCACCACCTGCGGCAGTCGCGTGGCAACGCCTTGAAGCTGGTCGTGCGCGAAATGGCGTCGACCCTGCGTTATCAAGACGAACAGTTGCTGCTGGCTTGTGGTG > NC_002947/3010043‑3010187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |