| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3265777 = | 45 (0.850) | 5 (0.100) | 5/240 | NT | 10.8% | coding (72/378 nt) | PP_2863 | membrane protein |
| ? | NC_002947 | 3265829 = | 40 (0.800) | coding (124/378 nt) | PP_2863 | membrane protein | |||||
CACCGAGCAGCTCACTGGCATGCAGCACTTTCTCGGGTGTACGCCAGGCCTGGTTACGTGCCTGCCGCTTGTCCTGCCAATACAGCAACAGGCTGATCAGGCTCATGGCCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAGGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3265931‑3265777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatgAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGTTGGCCGGGGGCGCTGTTGGCGCAGCAGCTGTTTC > NC_002947/3265829‑3265967 CACCGAGCAGCTCACTGGCATGCAGCACTTTCTCGGGTGTACGCCAGGCCTGGTTACGTGCCTGCCGCTTGTCCTGCCAATTCAGCAACAGGCTGATCAGGCTCATGGCCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAG > 8:208549/1‑149CACCGAGCAGCTCACTGGCATGCAGCACTTTCTCGGGTGTACGCCAGGCCTGGTTACGTGCCTGCCGCTTGTCCTGCCAATACAGCAACAGGCTGATCAGGCTCATGGCCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAG > 3:80388/1‑149 CGAGCAGCTCACTGGCATGCAGCACTTTCTCGGGTGTACGCCAGGCCTGGTTACGTGCCTGCCGCTTGTCCTGCCAATACAGCAACAGGCTGATCAGGCTCATGGCCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAGGCC < 3:186188/149‑1 GCAGCTCACTGGCATGCAGCACTTTCTCGGGTGTACGCCAGGCCTGGTTACGTGCCTGCCGCTTGTCCTGCCAATACAGCAACAGGCTGATCAGGCTCATGGCCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAGGCCATG < 5:70484/149‑1 GGCTCATGGCCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGACTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAG > 1:206072/1‑149 GCTCATGGCCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGC > 2:91722/1‑149 GCCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGG < 1:91722/149‑1 CCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGT > 2:340827/1‑149 CCAGGCCTGATCGTTCCAGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGTTGGCCGGGGGCGCTGTTGG < 1:340827/149‑1 CAGGCCTTGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGGCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGTTGGGCGGGGGCGCTGTTGGCGCAGCAGCTGTTTC < 2:206072/148‑1 CACCGAGCAGCTCACTGGCATGCAGCACTTTCTCGGGTGTACGCCAGGCCTGGTTACGTGCCTGCCGCTTGTCCTGCCAATACAGCAACAGGCTGATCAGGCTCATGGCCGGGTACAACGCCAATGGCCACCAGGCCTGATCGTTCCAGGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3265931‑3265777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatgAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGTTGGCCGGGGGCGCTGTTGGCGCAGCAGCTGTTTC > NC_002947/3265829‑3265967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |