New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3483144 = | 56 (1.060) | 4 (0.080) | 4/244 | NT | 7.3% | coding (2780/3804 nt) | PP_3091 | membrane protein |
? | NC_002947 | 3483187 = | 48 (0.950) | coding (2737/3804 nt) | PP_3091 | membrane protein |
CCAGTGGGACCTGCCGGTCAAGCAGGCCATCCCGGCCCCAGGCACCAGCCGCGATGACGGTTTCTGGAGCAAGGTCACCGGTCTGTTCGACGCCAACGACACCCTGCCTGCCAACGTCGCCCCGGCCCTGCCGGCGGTGGACGACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3483293‑3483144 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCAGGTCCCACTGGGTATTGTCGTTGACCGCCTGCAGCAGGTTCTTCACTGG > NC_002947/3483187‑3483331 CCAGTGGGACCTGCCGGTCAAGCAGGCCATCCCGGCCCCAGGCACCAGCCGCGATGACGGTTTCTGGAGCAAGGTCACCGGTCTGTTCGACGCCAACGACACCCTGCCTGCCAACGTCGCCCCGGCCCTGCCGGCGGTGGACGACGG > 4:95983/1‑147 CCAGTGGGACCTGCCGGTCAAGCAGGCCATCCCGGCCCCAGGCACCAGCCGCGATGACGGTTTCTGGAGCAAGGTCACCGGTCTGTTCGACGCCAACGACACCCTGCCTGCCAACGTCGCCCCGGCCCTGCCGGCGGTGGACGACGG > 6:24041/1‑147 CCAGTGGGACCTGCCGGTCAAGCAGGCCATCCCGGCCCCAGGCACCAGCCGCGATGACGGTTTCTGGAGCAAGGTCACCGGTCTGTTCGACGCCAACGACACCCTGCCTGCCAACGTCGCCCCGGCCCTGCCGGCGGTGGACGACGG > 8:126404/1‑147 CCCTGCCTGCCAACGTCGCCCCGGCCCTGCCGGCGGTGGACGACGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGAC < 1:343683/140‑1 CCCTGCCTGCCAACGTCGCCCCGGCCCTGCCGGCGGTGGACGACGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGAC > 2:343683/1‑140 CTGCCAACGTCGCCCCGGCCCTGCCGGCGGTGGACGACGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTT > 3:166277/1‑131 CTGCCAACGTCGCCCCGGCCCTGCCGGCGGTGGACGACGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTT < 4:166277/131‑1 GCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCAGGTCCCACTGGGTATTGTCGTTGACCGCCTGCAGCAGGTTCTTCACTGG > 1:346850/1‑149 CCAGTGGGACCTGCCGGTCAAGCAGGCCATCCCGGCCCCAGGCACCAGCCGCGATGACGGTTTCTGGAGCAAGGTCACCGGTCTGTTCGACGCCAACGACACCCTGCCTGCCAACGTCGCCCCGGCCCTGCCGGCGGTGGACGACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3483293‑3483144 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCAGGTCCCACTGGGTATTGTCGTTGACCGCCTGCAGCAGGTTCTTCACTGG > NC_002947/3483187‑3483331 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |