New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3568746	32 (0.610)	3 (0.060)	3/244	NT	8.2%	coding (1303/1998 nt)	PP_3150	hypothetical protein
	?	NC_002947	= 3568772	36 (0.710)					coding (1329/1998 nt)	PP_3150	hypothetical protein

TCATGTCATCGTCGACGAAGCCCACGAGCTGTCGGCACCGATGCTGGCGGTACTCGATCGCAGTCCGCAGTCGATCATTACCCTGGGTGACGAACTGCAAAACCTCAACGGCCTCAGCCCGCACCATGGCAGCTTCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3568604‑3568746 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcGCGCAGTGAATGGTCGATGCAGCGTTGCCGGATGAA  <  NC_002947/3568772‑3568737                                                                                                                                                                                     TCATGTCATCGTCGACGAAGCCCACGAGCTGTCGGCACCGATGCTGGCGGTACTCGATCGCAGTCCGCAGTCGATCATTACCCTGGGTGACGAACTGCAAAACCTCAACGGCCTCAGCCCGCACCATGGCAGCTTCATCCGG                                       <  5:39267/142‑1 TCATGTCATCGTCGACGAAGCCCACGAGCTGTCGGCACCGATGCTGGCGGTACTCGATCGCAGTCCGCAGTCGATCATTACCCTGGGTGACGAACTGCAAAACCTCAACGGCCTCAGCCCGCACCATGGCAGCTTCATCCGG                                       >  6:39267/1‑142                                gCGGCACCGATGCTGGCGGTACTCGATCGCAGTCCGCAGTCTATCATTACCCTGGGTGACGAACTGCAAAACCTCACCGGCCTCAGCCCGCACCATGGCAGCTTCATCCGGCGCGCAGTGAATGGTCGATGCAGCGTTGCCGGATGAA  <  6:166422/147‑1                                TCGGCACCGATGCTGGCGGTACTCGATCGCAGTCCGCAGTCGATCATTACCCTGGGTGACGAACTGCAAAACCTCAACGGCCTCAGCCCGCACCATGGCAGCTTCATCCGGCGCGCAGTGAATGGTCGATGCAGCGTTGCC         >  5:18989/1‑141                                TCGGCACCGATGCTGGCGGTACTCGATCGCAGTCCGCAGTCGATCATTACCCTGGGTGACGAACTGCAAAACCTCAACGGCCTCAGCCCGCACCATGGCAGCTTCATCCGGCGCGCAGTGAATGGTCGATGCAGCGTTGCC         <  6:18989/141‑1                                                                                                                                                                                     TCATGTCATCGTCGACGAAGCCCACGAGCTGTCGGCACCGATGCTGGCGGTACTCGATCGCAGTCCGCAGTCGATCATTACCCTGGGTGACGAACTGCAAAACCTCAACGGCCTCAGCCCGCACCATGGCAGCTTCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3568604‑3568746 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcGCGCAGTGAATGGTCGATGCAGCGTTGCCGGATGAA  <  NC_002947/3568772‑3568737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.