| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3585445 = | 50 (0.950) | 4 (0.080) | 4/240 | NT | 6.6% | coding (458/762 nt) | benD | 1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase |
| ? | NC_002947 | 3585515 = | 66 (1.320) | coding (528/762 nt) | benD | 1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase | |||||
CTGGTACCAGCGCTTTTCCTGCTCGGTTTGCTCTGCACTGTTGCGCGGTACGCGCCGGGGCGGTGCTTCGGTGCCGCCGGGCGCAGTGGCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3585599‑3585445‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccacTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGACAGCAGCCTGATGCACCGCTACGGCAGCATCGACGAG > NC_002947/3585515‑3585659 CTGGTACCAGCGCTTTTCCTGCTCGGTTTGCTCTGCACTGTTGCGCGGTACGCGCCGGGGCGGTGCTTCGGTGCCGCCGGGCGCAGTGGCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGA > 3:305217/1‑149 CCAGCGCTTTTCCTGCTCGGTTTGCTCTGCACTGTTGCGCGGTACGCGCCGGGGCGGTGCTTCGGTGCCGCCGGGCGCAGTGGCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCA < 5:363122/148‑1 GCGGTACGCGCCGGGGCGGTGCTTCGGTGCCGCCGGGCGCAGTGGCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCA < 3:18802/110‑1 GCGGTACGCGCCGGGGCGGTGCTTCGGTGCCGCCGGGCGCAGTGGCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCA > 4:18802/1‑110 TGGCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCT < 1:246395/146‑1 TGGCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCT > 2:246395/1‑146 GCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGG < 1:318467/146‑1 GCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGG > 2:318467/1‑146 ACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGA < 1:39900/108‑1 ACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGA > 2:39900/1‑108 CACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGACAGCAGCCTGATGCACCGCTACGGCAGCATCGACGAG > 1:117085/1‑148 CTGGTACCAGCGCTTTTCCTGCTCGGTTTGCTCTGCACTGTTGCGCGGTACGCGCCGGGGCGGTGCTTCGGTGCCGCCGGGCGCAGTGGCGTTGACGCGGATGCCCCGGCCGGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3585599‑3585445‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccacTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGACAGCAGCCTGATGCACCGCTACGGCAGCATCGACGAG > NC_002947/3585515‑3585659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |