| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3721856 = | 51 (0.970) | 5 (0.100) | 5/240 | NT | 9.2% | coding (348/798 nt) | fnrC | Crp/Fnr family transcriptional regulator |
| ? | NC_002947 | 3721886 = | 51 (1.020) | coding (318/798 nt) | fnrC | Crp/Fnr family transcriptional regulator | |||||
ATGCCTTACGCTGCGGCAGTTTCAAGACCAGCCTGAACACCGCCGAGGGGCAAGGCGTGGTGATCAACTTCTGGATGCCGGGCGATGTAATCGGCCTCGATGCCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3721965‑3721856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgccCGGCATCCAGAAGTTGATCACCACGCCTTGCCCCTCGGCGGTGTTCAGGCTGGTCTTGAAACTGCCGCAGCGTAAGGCATAGAGCATGGTCAGCGGATCGTTGGCATTGAACAGCGCGGCGCCCTTGCGAATGCGCATGCGTGGGC > NC_002947/3721886‑3722031 ATGCCTTACGCTGCGGCAGTTTCAAGACCAGCCTGAACACCGCCGAGGGGCAAGGCGTGGTGATCAACTTCTGGATGCCGGGCGATGGCATCGAGGCCGATTACATCGCCCGGCATCCAG < 7:138972/120‑1ATGCCTTACGCTGCGGCAGTTTCAAGACCAGCCTGAACACCGCCGAGGGGCAAGGCGTGGTGATCAACTTCTGGATGCCGGGCGATGGCATCGAGGCCGATTACATCGCCCGGCATCCAG > 8:138972/1‑120 GATGCCGGGCGATGTAATCGGCCTCGATGCCATCGCCCGGCATCCAGAAGTTGATCACCACGCCTTGCCCCTCGGCGGTGTTCAGGCTGGTCTTGAAACTGCCGCAGCGTAAGGCATAGAGCATGGTCAGCGGATCGTTG > 5:50562/1‑140 GATGCCGGGCGATGTAATCGGCCTCGATGCCATCGCCCGGCATCCAGAAGTTGATCACCACGCCTTGCCCCTCGGCGGTGTTCAGGCTGGTCTTGAAACTGCCGCAGCGTAAGGCATAGAGCATGGTCAGCGGATCGTTG < 6:50562/140‑1 CGGGCGATGTAATCGGCCTCGATGCCATCGCCCGGCATCCAGAAGTTGATCACAACGCCTTGCCCCTCGGCGGTGTTCAGGCTGGTCTTGAAACTGCCGAAGCGTAAGGCATAGAGCATGGTGCGCGGATGGTTGGCATTTAACAGCcg > 8:139987/1‑147 ATCGCCCGGCATCCAGAAGTTGATCACCACGCCTTGCCCCTCGGCGGTGTTCAGGCTGGTCTTGAAACTGCCGCAGCGTAAGGCATAGAGCATGGTCAGCGGATCGTTGGCATTGAACAGCGCGGCGCCCTTGCGAATGCGCATGCGTG < 3:170941/149‑1 GCCCGGCATCCAGAAGTTGATCACCACGCCTTGCCCCTCGGCGGTGTTCAGGCTGGTCTTGAAACTGCCGCAGCGTAAGGCATAGAGCATGGTCAGCGGATCGTTGGCATTGAACAGCGCGGCGCCCTTGCGAATGCGCATGCGTGGGC > 3:134234/1‑149 ATGCCTTACGCTGCGGCAGTTTCAAGACCAGCCTGAACACCGCCGAGGGGCAAGGCGTGGTGATCAACTTCTGGATGCCGGGCGATGTAATCGGCCTCGATGCCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3721965‑3721856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgccCGGCATCCAGAAGTTGATCACCACGCCTTGCCCCTCGGCGGTGTTCAGGCTGGTCTTGAAACTGCCGCAGCGTAAGGCATAGAGCATGGTCAGCGGATCGTTGGCATTGAACAGCGCGGCGCCCTTGCGAATGCGCATGCGTGGGC > NC_002947/3721886‑3722031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |