New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3952798 =	51 (0.970)	3 (0.060)	3/242	NT	5.2%	coding (1725/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein
	?	NC_002947	3952837 =	61 (1.210)					coding (1686/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein

ACTGCTTCAGCACCGAGGTGGCCGCAGGTGCCAGTGCCGGCGAACGCAAAGGTGCGCGTGCCGAGTTCATCGGCCTCGACCAGCCGCTGCCGCAGCACAGCGACTTCACCGCGCGGGTGCGTATTGTCGGTGACGACGGGCAGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3952946‑3952798 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcGGTGAAGTCGCTGTGCTGCGGCAGCGGCTGGTCGAGGCCGATGAACTCGGCACGCGCACCTTTGCGTTCGCCGGCACTGGCACCTGCGGCCACCTCGGTGCTGAAGCAGTGAATGATTTGCGGCTGGTTGAGCAGGAATGCAAC  >  NC_002947/3952837‑3952980                                                                                                                                                                                                                                                                                                       ACTGCTTCAGCACCGAGGTGGCCGCAGGTGCCAGTGCCGGCGAACGCAAAGGTGCGCGTGCCGAGTTCATCGGCCTCGACCAGCCGCTGCCGCAGCACAGCGACTTCACCGCGCGGGTGCGTATTGTCGGTGACGACGGGCAGCCGCGC                                                                                                                                                  >  5:354402/1‑149                            GTGCCAGTGCCGGCGAACGCAAAGGTGCGCGTGCCGAGTTCATCGGCCTCGACCAGCCGCTGCCGCAGCACAGCGACTTCACCGCGCGGGTGCGTATTGTCGGTGACGACGGGCAGCCGCGC                                                                                                                                                  <  4:32286/122‑1                                                                                                      GACTTCACCGCGCGGGTGCGTATTGTCGGTGACGACGGGCAGCCGCGCGGTGAAGTCGCTGTGCTGCGGCAGCGGCTGGTCGAGGCCGATGAACTCGGCACGCGCACCTTTGCGTTCGCCGGCACTGGCACCTGCGGCCACCTCGGTGC                                             >  8:277064/1‑149                                                                                                              CGCGCGGGTGCGTATTGTCGGTGACGACGGGCAGCCGCGCGGTGAAGTCGCTGTGCTGCGGCAGCGGCTGGTCGAGGCCGATGAACTCGGCACGCGCACCTTTGCGTTCGCCGGCACTGGCACCTGCGGCCACCTCGGTGCTGAAGC                                       >  1:240663/1‑147                                                                                                              CGCGCGGGTGCGTATTGTCGGTGACGACGGGCAGCCGCGCGGTGAAGTCGCTGTGCTGCGGCAGCGGCTGGTCGAGGCCGATGAACTCGGCACGCGCACCTTTGCGTTCGCCGGCACTGGCACCTGCGGCCACCTCGGTGCTGAAGC                                       <  2:240663/147‑1                                                                                                                                        atacGCAGCCGCGCGGTGAAGTCGCTGTGCTGCGGCAGCGGCTGGTCGAGGCCGATGAACTCGGCACGCGCACCTTTGCGTTCGCCGGCACTGGCACCTGCGGCCACCTCGGTGCTGAAGCAGTGAATGATTTGCGGCTGGTTGAGCAG           <  4:265927/145‑1                                                                                                                                                 CGCGCGGTGAAGTCGCTGTGCTGCGGCAGCGGCTGGTCGAGGCCGATGAACTCGGCACGCGCACCTTTGCGTTCGCCGGCACTGGCACCTGCGGCCACCTCGGTGCTGAAGCAGTGAATGATTTGCGGCTGGTTGAGCAGGAATGCAAC  <  1:102272/149‑1                                                                                                                                                 CGCGCGGTGAAGTCGCTGTGCTGCGGCAGCGGCTGGTCGAGGCCGATGAACTCGGCACGCGCACCTTTGCGTTCGCCGGCACTGGCACCTGCGGCCACCTCGGTGCTGAAGCAGTGAATGATTTGCGGCTGGTTGAGCAGGAATGCAAC  >  3:152588/1‑149                                                                                                                                                                                                                                                                                                       ACTGCTTCAGCACCGAGGTGGCCGCAGGTGCCAGTGCCGGCGAACGCAAAGGTGCGCGTGCCGAGTTCATCGGCCTCGACCAGCCGCTGCCGCAGCACAGCGACTTCACCGCGCGGGTGCGTATTGTCGGTGACGACGGGCAGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3952946‑3952798 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcGGTGAAGTCGCTGTGCTGCGGCAGCGGCTGGTCGAGGCCGATGAACTCGGCACGCGCACCTTTGCGTTCGCCGGCACTGGCACCTGCGGCCACCTCGGTGCTGAAGCAGTGAATGATTTGCGGCTGGTTGAGCAGGAATGCAAC  >  NC_002947/3952837‑3952980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.