New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4330864 | 69 (1.310) | 5 (0.100) | 5/240 | NT | 7.5% | coding (310/747 nt) | PP_3802 | cation ABC transporter ATP‑binding protein |
? | NC_002947 | = 4330915 | 59 (1.180) | coding (361/747 nt) | PP_3802 | cation ABC transporter ATP‑binding protein |
AAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4330711‑4330864 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggccgGC‑‑‑TTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGC < NC_002947/4330915‑4330770 AAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCAT < 5:203545/149‑1 TCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGG > 8:124583/1‑149 GACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGG > 2:120840/1‑134 ACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATG < 3:152081/112‑1 ACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATG > 4:152081/1‑112 GCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGC‑‑‑TTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGc > 6:142048/1‑148 GGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGC‑‑‑TTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCAT < 5:142048/148‑1 GCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGC‑‑‑TTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATG < 7:124583/148‑1 GTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCAC < 1:35522/111‑1 GTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGCCATGTGCCAGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCAC > 2:35522/1‑111 CCGGC‑‑‑TTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATG > 7:54774/1‑148 CCGGC‑‑‑TTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATG > 8:117541/1‑148 CGGC‑‑‑TTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGC > 3:19180/1‑148 AAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4330711‑4330864 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggccgGC‑‑‑TTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGC < NC_002947/4330915‑4330770 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |