New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4417777 | 59 (1.120) | 4 (0.080) | 4/242 | NT | 6.5% | coding (99/270 nt) | PP_3906 | hypothetical protein |
? | NC_002947 | = 4417807 | 58 (1.150) | coding (129/270 nt) | PP_3906 | hypothetical protein |
TTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4417625‑4417777 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagaTGCTTGGTAGCGCGGGGCTCCCTGTGCGATTCTGGCGAAGGCTTCGTTGCGCGCTTCCTGGCTGCGTTCAAGCAACGCTGCGAGCACCATTCGCTTGTCCTCGAAAGCTTTATGCACGGCTGTCTGCATGTGGTGATCCTCGGGTGG < NC_002947/4417807‑4417661 TTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGC > 5:4938/1‑149 CCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCGGGAAGCGCGCAACGAAGCCTTCGCCAGATGCTTGGTAGCGCGGGGCTCCCTGTGCGATTC > 5:75228/1‑149 AGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCGGGAAGCGCGCAACGAAGCCTTCGCCAGATGCTTGGTAGCGCGGGGCTCCCTGTGCGATTCTGGCGAA < 6:75228/149‑1 CATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGC > 7:24802/1‑96 CATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGC < 8:24802/96‑1 TTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCACCAGATGCTTGGTAGCGCGGGGCTCCCTGTGCGATTCTG > 1:15716/1‑110 TTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCACCAGATGCTTGGTAGCGCGGGGCTCCCTGTGCGATTCTG < 2:15716/110‑1 CCAGATGCTTGGTAGCGCGGGGCTCCCTGTGCGATTCTGGCGAAGGCTTCGTTGCGCGCTTCCTGGCTGCGTTCAAGCAACGCTGCGAGCACCATTCGCTTGTCCTCGAAAGCTTTATGCACGGCTGTCTGCATGTGGTGATCCTCGGG > 8:35912/1‑149 AGATGCTTGGTAGCGCGGGGCTCCCTGTGCGATTCTGGCGAAGGCTTCGTTGCGCGCTTCCTGGCTGCGTTCAAGCAACGCTGCGAGCACCATTCGCTTGTCCTCGAAAGCTTTATGCACGGCTGTCTGCATGTGGTGATCCTCGGGTG > 4:219328/1‑149 GATGCTTGGTAGCGCGGGGCTCCCTGTGCGATTCTGGCGAAGGCTTCGTTGCGCGCTTCCTGGCTGCGTTCAAGCAACGCTGCGAGCACCATTCGCTTGTCCTCGAAAGCTTTATGCACGGCTGTCTGCATGTGGTGATCCTCGGGTGG < 2:317034/149‑1 GATGCTTGGTAGCGCGGGGCTCCCTGTGCGATTCTGGCGAAGGCTTCGTTGCGCGCTTCCTGGCTGCGTTCAAGCAACGCTGCGAGCACCATTCGCTTGTCCTCGAAAGCTTTATGCACGGCTGTCTGCATGTGGTGATCCTCGGGTGG < 5:281485/149‑1 TTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4417625‑4417777 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagaTGCTTGGTAGCGCGGGGCTCCCTGTGCGATTCTGGCGAAGGCTTCGTTGCGCGCTTCCTGGCTGCGTTCAAGCAACGCTGCGAGCACCATTCGCTTGTCCTCGAAAGCTTTATGCACGGCTGTCTGCATGTGGTGATCCTCGGGTGG < NC_002947/4417807‑4417661 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |