New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4502694 =	56 (1.060)	3 (0.060)	3/242	NT	5.2%	coding (323/1380 nt)	xanP	xanthine permease
	?	NC_002947	4502730 =	57 (1.130)					coding (359/1380 nt)	xanP	xanthine permease

GCCAGTCACCAGCGGGGTGATCAGGCGTTTGACGAAGGGCAGGATGCGCGACACGCCCATCTCGACGAACGAGCCCGCGATTACTACGCCAAAAATGGCTGCCATTACGCCTTCAACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4502845‑4502694 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggTTGAAGGCGTAATGGCAGCCATTTTTGGCGTAGTAATCGCGGGCTCGTTCGTCGAGATGGGCGTGTCGCGCATCCTGCCCTTCGTCAAACGCCTGATCACCCCGCTGGTGACTGGCATCGTGGTGTTGATGATCGGCCTGACGCTGA  >  NC_002947/4502730‑4502876                                                                                                                                                                                                                                                                                                             GCCAGTCACCAGCGGGGTGATCAGGCGTTTGACGAAGGGCAGGATGCGCGACACGCCCATCTCGACGAACGAGCCCGCGATTACTACGCCAAAAATGGCTGCCATTACGCCTTCAACCGGCGTGCCTTGCTTGACCATCAGCGCACCGC                                                                                                                                                        >  6:14055/1‑149   CAGTCACCAGCGGGGTGATCAGGCGTTTGACGAAGGGCAGGATGCGCGACACGCCCATCTCGACGAACGAGCCCGCGATTACTACGCCAAAAATGGCTGCCATTACGCCTTCAACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCG                                                                                                                                                      >  8:47939/1‑149    AGTCACCAGCGGGGTGATCAGGCGTTTGACGAAGGGCAGGATGCGCGACACGCCCATCTCGACGAACGAGCCCGCGATTACTACGCCAAAAATGGCTGCCATTACGCCTTCAACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCGG                                                                                                                                                     >  4:292775/1‑149                               GACGAAGGGCAGGATGCGCGACACGCCCATCTCGACGAACGAGCCCGCGATTACTACGCCAAAAATGGCTGCCATTACGCCTTCAACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCGG                                                                                                                                                     >  4:88233/1‑122                                                                GACGAACGAGCCCGCGATTACTACGCCAAAAATGGCTGCCATTACGCCTTCAACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCGG                                                                                                                                                     >  7:328269/1‑89                                                                GACGAACGAGCCCGCGATTACTACGCCAAAAATGGCTGCCATTACGCCTTCAACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCGG                                                                                                                                                     <  8:328269/89‑1                                                                                                               CTTCAACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCGGTTGAAGGCGTAATGGCAGCCATTTTTGGCGTAGTAATCGCGGGCTCGTTCGTCGAGATGGGCGTGTCGCGCATCCTGCCCTTCGTCAAACGCCTGATCACCCCGCTG                                          >  7:183975/1‑149                                                                                                                    ACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCGGTTGAAGGCGTAATGGCAGCCATTTTTGGCGTAGTAATCGCGGGCTCGTTCGTCGAGATGGGCGTGTCGCGCATCCTGCCCTTCGTCAAACGCCTGATCACC                                                <  5:144778/138‑1                                                                                                                    ACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCGGTTGAAGGCGTAATGGCAGCCATTTTTGGCGTAGTAATCGCGGGCTCGTTCGTCGAGATGGGCGTGTCGCGCATCCTGCCCTTCGTCAAACGCCTGATCACC                                                >  6:144778/1‑138                                                                                                                                                    GCCGGTTGAAGGCGTAATGGCAGCCATTTTTGGCGTAGTAATCGCGGGCTCGTTCGTCGAGATGGGCGTGTCGCGCATCCTGCCCTTCGTCAAACGCCTGATCACCCCGCTGGTGACTGGCATCGTGGTGTTGATGATCGGCCTGACGC     >  2:268404/1‑149                                                                                                                                                       GGTTGAAGGCGTAATGGCAGCCATTTTTGGCGTAGTAATCGCGGGCTCGTTCGTCGAGATGGGCGTGTCGCGCATCCTGCCCTTCGTCAAACGCCTGATCACCCCGCTGGTGACTGGCATCGTGGTGTTGATGATCGGCCTGACGCTGA  <  7:288292/149‑1                                                                                                                                                                                                                                                                                                             GCCAGTCACCAGCGGGGTGATCAGGCGTTTGACGAAGGGCAGGATGCGCGACACGCCCATCTCGACGAACGAGCCCGCGATTACTACGCCAAAAATGGCTGCCATTACGCCTTCAACCGGCGTGCCTTGCTTGACCATCAGCGCACCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4502845‑4502694 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggTTGAAGGCGTAATGGCAGCCATTTTTGGCGTAGTAATCGCGGGCTCGTTCGTCGAGATGGGCGTGTCGCGCATCCTGCCCTTCGTCAAACGCCTGATCACCCCGCTGGTGACTGGCATCGTGGTGTTGATGATCGGCCTGACGCTGA  >  NC_002947/4502730‑4502876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.