| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4584077 | 59 (1.120) | 6 (0.120) | 4/244 | NT | 8.8% | coding (1507/1986 nt) | glgE | alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase |
| ? | NC_002947 | = 4584103 | 68 (1.340) | coding (1481/1986 nt) | glgE | alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase | |||||
GTTGCCGGGCTGGGTGAAATCGCGTGGGCGGATTTCGTACTTCTCCGAATCCAGGTACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4583952‑4584077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgaTCCGTGCCGCGCTGGCGACCATGGGCTCAGGCTTGTGGGGCATGTATTCGGGCTTCGAGCTGTGCGAGGGCACGCCGTTGCCGGGCAAGGAGGAGT < NC_002947/4584103‑4584008 GTTGCCGGGCTGGGTGAAATCGCGTGGGCGGATTTCGTACTTCTCCGAATCCAGGTACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGATCCGTGCCGCGCTGGCGACCATG > 4:58603/1‑149GTTGCCGGGCTGGGTGAAATCGCGTGGGCGGATTTCGTACTTCTCCGAATCCAGGTACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGATCCGTGCCGCGCTGGCGACCATG > 4:63335/1‑149 TGGGTGAAATCGCGTGGGCGGATTTCGTACTTCTCCGAATCCAGGTACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGATCCGTGCCGCGCTGGCGACCATGGGCTCAGGCT < 3:58603/149‑1 TGGGTGAAATCGCGTGGGCGGATTTCGTACTTCTCCGAATCCAGGTACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGATCCGTGCCGCGCTGGCGACCATGGGCTCAGGCT < 3:63335/149‑1 ATCGCGTGGGCGGATTTCGTACTTCTCCGAATCCAGGTACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGATCCGTGCCGCGCTGGCGACCATGGGCTCAGGCTTGTGGGGC < 4:12361/149‑1 ATCGCGTGGGCGGATTTCGTACTTCTCCGAATCCAGGTACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGATCCGTGCCGCGCTGGCGACCATGGGCTCAGGCTTGTGGGG > 3:12361/1‑148 CTGATCCGTGCCGCGCTGGCGACCATGGGCTCAGGCTTGTGGGGCATGTATTCGGGCTTCGAGCTGTGCGAGGGCACGCCGTTGCCGGGCAAGGAGGAGT > 4:171745/1‑100 GTTGCCGGGCTGGGTGAAATCGCGTGGGCGGATTTCGTACTTCTCCGAATCCAGGTACTCCTCCTTGCCCGGCAACGGCGTGCCCTCGCACAGCTCGAAGCCCGAATACATGCCCCACAAGCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4583952‑4584077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgaTCCGTGCCGCGCTGGCGACCATGGGCTCAGGCTTGTGGGGCATGTATTCGGGCTTCGAGCTGTGCGAGGGCACGCCGTTGCCGGGCAAGGAGGAGT < NC_002947/4584103‑4584008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |