| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4924679 | 50 (0.950) | 3 (0.060) | 3/236 | NT | 5.7% | coding (371/855 nt) | PP_4334 | ParA family protein |
| ? | NC_002947 | = 4924695 | 52 (1.060) | coding (355/855 nt) | PP_4334 | ParA family protein | |||||
CACCGGGATCACCAGCTGCTGGCTGGCGGCCAGGGCATTGACCATCAGCACACCCAGCAAGGGTGGGCTGTCGATCAGGGCATAGTCGAAATCCTGCCACAGCTGCGCCAGACTCTTGGCGATTACCAGGCCCAGGCCATTCTGCCCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4924528‑4924679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctggcgGTGCTGGAGCGCCAG‑‑TCGCCAGGGCAGAATGGCCTGGGCCTGGTAATCGCCAAGAGTCTGGCGCAGCTGTGGCAGGATTTCGACTATGCCCTGATCGACAGCCCACCCTTGCTGGGTGTGCTGATGGTCAATGCCCTGGCCGCCA < NC_002947/4924695‑4924551 CACCGGGATCACCAGCTGCTGGCTGGCGGCCAGGGCATTGACCATCAGCACACCCAGCAAGGGTGGGCTGTCGATCAGGGCATAGTCGAAATCCTGCCACAGCTGCGCCAGACTCTTGGCGATTACCAGGCCCAGGCCATTCTGCCCT < 8:180386/148‑1 ACCGGGATCACCAGCTGCTGGCTGGCGGCCAGGGCATTGACCATCAGCACACCCAGCAAGGGTGGGCTGTCGATCAGGGCATAGTCGAAATCCTGCCACAGCTGCGCCAGACTCTTGGCGATTACCAGGCCCAGGCCATTCTGCCCTGG > 5:47912/1‑149 CCGGGATCACCAGCTGCTGGCTGGCGGCCAGGGCATTGACCATCAGCACACCCAGCAAGGGTGGGCTGTCGATCAGGGCATAGTCGAAATCCTGCCACAGCTGCGCCAGACTCTTGGCGATTACCAGGCCCAGGCCATTCTGCCCTGGC > 8:116173/1‑149 CGGGATCACCAGCTGCTGGCTGGCGGCCAGCGCATTGACCATCAGCACACCCAGCAAGGGTGGGCTGTCGATCAGGGCATAGTCGAAATCCTGCCACAGCTGCGCCAGACTCTTGGCGATTACCAGGCCCAGGCCATTCTGCCCTGGC > 1:31468/1‑148 CCAGCAAGGGTGGGCTGTCGATCAGGGCATAGTCGAAATCCTGCCACAGCTGCGCCAGACTCTTGGCGATTACCAGGCCCAGGCCATTCTGCCCTGGCGGTGCTGGAGCGCCAG‑‑TCGCCAGGGC < 3:264127/124‑1 CCAGCAAGGGTGGGCTGTCGATCAGGGCATAGTCGAAATCCTGCCACAGCTGCGCCAGACTCTTGGCGATTACCAGGCCCAGGCCATTCTGCCCTGGCGGTGCTGGAGCGCCAG‑‑TCGCCAGGGC > 4:264127/1‑124 CAGGCCATTCTGCCCTGGCG‑‑ACTGGCGCTCCAGCACCGCCAGGGCAGAATGGCCTGGGCCTGGTAATCGCCAAGAGTCTGGCGCAGCTGTGGCAGGATTTCGACTATGCCCTGATCGACAGCCCACCCTTGCTGGGTGTGCTGATGGT > 6:47912/1‑148 CCTGGCGGTGCTGGAGCGCCAG‑‑TCGCCAGGGCAGAATGGCCTGGGCCTGGTAATCGCCAAGAGTCTGGCGCAGCTGTGGCAGGATTTCGACTATGCCCTGATCGACAGCCCACCCTTGCTGGGTGTGCTGATGGT > 7:334944/1‑135 CCTGGCGGTGCTGGAGCGCCAG‑‑TCGCCAGGGCAGAATGGCCTGGGCCTGGTAATCGCCAAGAGTCTGGCGCAGCTGTGGCAGGATTTCGACTATGCCCTGATCGACAGCCCACCCTTGCTGGGTGTGCTGATGGT < 8:334944/135‑1 GCGGTGCTGGAGCGCCAG‑‑TCGCCAGGGCAGAATGGCCTGGGCCTGGTAATCGCCAAGAGTCTGGCGCAGCTGTGGCAGGATTTCGACTATGCCCTGATCGACAGCCCACCCTTGCTGGGTGTGCTGATGGTCAATGCCCTGGCCGCCA < 2:326146/148‑1 GCGGTGCTGGAGCGCCAG‑‑TCGCCAGGGCAGAATGGCCTGGGCCTGGTAATCGCCAAGAGTCTGGCGCAGCTGTGGCAGGATTTCGACTATGCCCTGATCGACAGCCCACCCTTGCTGGGTGTGCTGATGGTCAATGCCCTGGCCGCCA < 3:15084/148‑1 CACCGGGATCACCAGCTGCTGGCTGGCGGCCAGGGCATTGACCATCAGCACACCCAGCAAGGGTGGGCTGTCGATCAGGGCATAGTCGAAATCCTGCCACAGCTGCGCCAGACTCTTGGCGATTACCAGGCCCAGGCCATTCTGCCCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4924528‑4924679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctggcgGTGCTGGAGCGCCAG‑‑TCGCCAGGGCAGAATGGCCTGGGCCTGGTAATCGCCAAGAGTCTGGCGCAGCTGTGGCAGGATTTCGACTATGCCCTGATCGACAGCCCACCCTTGCTGGGTGTGCTGATGGTCAATGCCCTGGCCGCCA < NC_002947/4924695‑4924551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |