New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5120858 = | 67 (1.270) | 4 (0.080) | 3/250 | NT | 5.7% | coding (501/1455 nt) | trkH‑II | potassium transporter |
? | NC_002947 | 5120895 = | 66 (1.270) | coding (538/1455 nt) | trkH‑II | potassium transporter |
CCGACATGGCATGGTTGATTGCATCGAACGGGCTCATGCCCGCCCACCAGAAGGCCAGCGCGCCGAGTATCGAGAAACCGACGTAAACCCCCACGATGGACTTGGCGACCATGTGCGAACGCGGCATGACCTTTTCCGAGCGGTCGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5121006‑5120858 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acATGGTCGCCAAGTCCATCGTGGGGGTTTACGTCGGTTTCTCGATACTCGGCGCGCTGGCCTTCTGGTGGGCGGGCATGAGCCCGTTCGATGCAATCAACCATGCCATGTCGGCTATCTCTACCGGCGGTTTCTCCACCTCCGAC > NC_002947/5120895‑5121038 CCGACATGGCATGGTTGATTGCATCGAACGGGCTCATGCCCGCCCACCAGAAGGCCAGCGCGCCGAGTATCGAGAAACCGACGTAAACCCCCACGATGGACTTGGCGACCATGTGCGAACGCGGCATGACCTTTTCCGAGCGGTCAGAC < 6:340849/149‑1 GACCATGTGCGAACGCGGCATGACCTTTTCCGAGCGGTCGGACATGGTCGCCAAGTCCATCGTGGGGGTTTACGTCGGTTTCTCGATACTCGGCGCGCTGGCCTTCTGGTGGGCGG > 3:6892/1‑116 GACCATGTGCGAACGCGGCATGACCTTTTCCGAGCGGTCGGACATGGTCGCCAAGTCCATCGTGGGGGTTTACGTCGGTTTCTCGATACTCGGCGCGCTGGCCTTCTGGTGGGCGG < 4:6892/116‑1 CCATGTGCGAACGCGGCATGACCTTTTCCGAGCGGTCGGACATGGTCGCCAAGTCCATCGTGGGGGTTTACGTCGGTTTCTCGATACTCGGCGCGCTGGCCTTCTGGTGGGCGGGCATGAGCCCGTTCGATGCAATCAACCATGCCATG > 7:176393/1‑149 CCATGTGCGAACGCGGCATGACCTTTTCCGAGCGGTCGGACATCGTCGCCAAGTCCATCGTGGGGGTTTACGACGGTTTATCGATACTCGGCGCGCTGGCCTTCTGGTGGGCGGGCATGAGCCCGTTCGATGCAATCAACCATGCCATG > 7:286665/1‑149 GGACATGGTCGCCAAGTCCATCGTGGGGGTTTACGTCGGTTTCTCGATACTCGGCGCGCTGGCCTTCTGGTGGGCGGGCATGAGCCCGTTCGATGCAATCAACCATGCCATGTCGGCTATCTCTACCGGCGGTTTCTCCACCTCCGAC < 8:176393/148‑1 CCGACATGGCATGGTTGATTGCATCGAACGGGCTCATGCCCGCCCACCAGAAGGCCAGCGCGCCGAGTATCGAGAAACCGACGTAAACCCCCACGATGGACTTGGCGACCATGTGCGAACGCGGCATGACCTTTTCCGAGCGGTCGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5121006‑5120858 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acATGGTCGCCAAGTCCATCGTGGGGGTTTACGTCGGTTTCTCGATACTCGGCGCGCTGGCCTTCTGGTGGGCGGGCATGAGCCCGTTCGATGCAATCAACCATGCCATGTCGGCTATCTCTACCGGCGGTTTCTCCACCTCCGAC > NC_002947/5120895‑5121038 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |