New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5142249	55 (1.040)	6 (0.120)	5/242	NT	9.7%	coding (584/1173 nt)	PP_4526	MFS transporter
	?	NC_002947	= 5142277	59 (1.170)					coding (612/1173 nt)	PP_4526	MFS transporter

CGTGACCGGGCTACTGGCACTGGTTGCGCATGTGCTGGGGCTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5142097‑5142249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagtGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGCGACTGAGTCGGTGCCGCTTGCAATGCCCGTGGCAACCACGGCCGCACGGCCAGCAGCATCACCAGCGCAGCTACGGCATAGATCAGCCACAGGGCTGCCGAGCCAAGCCCCAGC  <  NC_002947/5142277‑5142130                                                                                                                                                                                                                                                                                                               CGTGACCGGGCTACTGGCACTGGTTGCGCATGTGCTGGGGCTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGC                                                                                                                                                          <  4:136334/149‑1   TGACCGGGCTACTGGCACTGGTTGCGCATGTGCTGGGGCTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCA                                                                                                                                                        <  1:54268/149‑1   TGACCGGGCTACTGGCACTGGTTGCGCATGTGCTGGGGCTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCA                                                                                                                                                        <  8:213352/149‑1               TGGCACTGGTTGCGCATGTGCTGGGGCTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCA                                                                                                                                                        >  3:217654/1‑137               TGGCACTGGTTGCGCATGTGCTGGGGCTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCA                                                                                                                                                        <  4:217654/137‑1                               TGTGCTGGGGCTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCC                                                                                                                                                         <  5:188066/120‑1                               TGTGCTGGGGCTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCC                                                                                                                                                         >  6:188066/1‑120                                         CTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCAGTGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGC                                                                                                                    <  1:312021/147‑1                                         CTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCAGTGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGC                                                                                                                    >  2:312021/1‑147                                               TCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCAGTGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGC                                                                                                                    >  3:320325/1‑141                                               TCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCAGTGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGC                                                                                                                    <  4:320325/141‑1                                                                    TATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCAGTGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGCGA                                                                                                                  <  5:264595/122‑1                                                                    TATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCAGTGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGCGA                                                                                                                  >  6:264595/1‑122                                                                                                                                                       AGTGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGCGACTGAGTCGGTGCCGCTTGCAATGCCCGTGGCAACCACGGCCGCACGGCCAGCAGCATCACCAGCGCAGCTACGGCATAGATCAGCCACAGGGCTGCCGAGCCAAGCCCCA    <  5:49715/149‑1                                                                                                                                                         TGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGCGACTGAGTCGGTGCCGCTTGCAATGCCCGTGGCAACCACGGCCGCACGGCCAGCAGCATCACCAGCGCAGCTACGGCATAGATCAGCCACAGGGCTGCCGAGCCAAGCCCCAGC  <  8:2412/149‑1                                                                                                                                                                                                                                                                                                               CGTGACCGGGCTACTGGCACTGGTTGCGCATGTGCTGGGGCTTGGCTCGGCAGCCCTGTGGCTGATCTATGCCGTAGCTGCGCTGGTGATGCTGCTGGCCGTGCGGCCGTGGTTGCCACGGGCATTGCAAGCGGCACCGACTCAGTCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5142097‑5142249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagtGCCGACATTGCGCGTCGGGCCTTGTCGTACTGGCGACTGAGTCGGTGCCGCTTGCAATGCCCGTGGCAACCACGGCCGCACGGCCAGCAGCATCACCAGCGCAGCTACGGCATAGATCAGCCACAGGGCTGCCGAGCCAAGCCCCAGC  <  NC_002947/5142277‑5142130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.