New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5273125	62 (1.170)	4 (0.080)	4/244	NT	6.4%	coding (272/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G
	?	NC_002947	= 5273170	57 (1.120)					coding (317/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G

CCGACGCCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGTGCCCTGGCCGCAAGCCTTGCAGGCCAGCTGCAGGTGGTCAGCAGCGGTGACTCGCACCTGGGGCACCTGGCCCTGGAAAAGAACCTGGCGCGCAATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5272981‑5273125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctTGCCAGTGTTCGCTGGCCGGTACGAACGGCACACTGTCGAACGGCAGGCCATTGCGCGCCAGGTTCTTTTCCAGGGCCAGGTGCCCCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGGG  <  NC_002947/5273170‑5273026                                                                                                                                                                                                                                                                                                    CCGACGCCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGTGCCCTGGCCGCAAGCCTTGCAGGCCAGCTGCAGGTGGTCAGCAGCGGTGACTCGCACCTGGGGCACCTGGCCCTGGAAAAGAACCTGGCGCGCAATGGCCTTGC                                                                                                                                                >  5:112599/1‑148                                              CCCTGGCCGCAAGCCTTGCAGGCCAGCTGCAGGTGGTCAGCAGCGGTGACTCGCACCTGGGGCACCTGGCCCTGGAAAAGAACCTGGCGCGCAATGGCCTTGCCAGTGTTCGCTGGCCGGTACGAACGGCACACTGTCGAACGGCAGGC                                                                                                  <  6:112599/149‑1                                                      GCAAGCCTTGCAGGCCAGCTGCAGGTGGTCAGCAGCGGTGACTCGCACCTGGGGCACCTGGCCCTGTAAAAGAACCTGGCGCGCAATGGCCTTGCCAGTGTTCGCTGGCCGGTACGAACGGCACACTGTCGAACGGCAGTCCATTGCGC                                                                                          <  2:338689/149‑1                                                           CCTTGCAGGCCAGCTGCAGGTGGTCAGCAGCGGTGACTCGCACCTGGGGCACCTGGCCCTGGAAAAGAACCTGGCGCGCAATGGCCTTGCCAGTGTTCGCTGGCCGGTACGAACGGCACACTGTCGAACGGCAGGCCATTG                                                                                             <  3:6792/141‑1                                                           CCTTGCAGGCCAGCTGCAGGTGGTCAGCAGCGGTGACTCGCACCTGGGGCACCTGGCCCTGGAAAAGAACCTGGCGCGCAATGGCCTTGCCAGTGTTCGCTGGCCGGTACGAACGGCACACTGTCGAACGGCAGGCCATTG                                                                                             >  4:6792/1‑141                                                                                                                                             GGCCTTGCCAGTGTTCGCTGGCCGGTACGAACGGCACACTGTCGAACGGCAGGCCATTGCGCGCCAGGTTCTTTTCCAGGGCCAGGTGCCCCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGG   <  3:122992/149‑1                                                                                                                                              GCCTTGCCAGTGTTCGCTGGCCGGTACGAACGGAACACTGTCGAACGGCAGGCCATTGAGCGCCAGGTTCTTTTCCAGGGACAGGTGCCCCAGGTGCGAGTCACCGCTGCTGACCACCTGCACCTGGCCTCAAAGCCTTGCGGCCAGGG  >  8:149540/1‑149                                                                                                                                                                                                                                                                                                    CCGACGCCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGTGCCCTGGCCGCAAGCCTTGCAGGCCAGCTGCAGGTGGTCAGCAGCGGTGACTCGCACCTGGGGCACCTGGCCCTGGAAAAGAACCTGGCGCGCAATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5272981‑5273125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctTGCCAGTGTTCGCTGGCCGGTACGAACGGCACACTGTCGAACGGCAGGCCATTGCGCGCCAGGTTCTTTTCCAGGGCCAGGTGCCCCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGGG  <  NC_002947/5273170‑5273026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.