| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5319136 = | 64 (1.210) | 4 (0.080) | 4/238 | NT | 6.8% | coding (238/1725 nt) | ilvI | acetohydroxybutanoate synthase/acetolactate synthase |
| ? | NC_002947 | 5319189 = | 50 (1.010) | coding (185/1725 nt) | ilvI | acetohydroxybutanoate synthase/acetolactate synthase | |||||
GCTCTCCTGCATGTTTACGACGCACTGTTCAAAGAACCGGAAGTGGAACACATCCTGGTTCGTCACGAGCAGGCGGCCACCCATATGGCGGACGGCTACGCTCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5319289‑5319136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgaGCGTAGCCGTCCGCCATATGGGTGGCCGCCTGCTCGTGACGAACCAGGATGTGTTCCACTTCCGGTTCTTTGAACAGTGCGTCGTAAACATGCAGGAGAGCACCACCAGGGTACCCGTAGATGTGCTTAACGCCTTCGTCACGC > NC_002947/5319189‑5319332 GCTCTCCTGCATGTTTACGACGCACTGTTCAAAGAACCGGAAGTGGAACACATCCTGGTTCGTCACGAGCAGGCGGCCACCCATATGGCGGACGGCTACGCTCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGG > 7:269705/1‑149 TCTCCTGCATGTTTACGACGCACTGTTCAAAGAACCGGAAGTGGAACACATCCTGGTTCGTCACGAGCAGGCGGCCACCCATATGGCGGACGGCTACGCTCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCG > 5:256383/1‑149 TCTCCTGCATGTTTACGACGCACTGTTCAAAGAACCGGAAGTGGAACACATCCTGGTTCGTCACGAGCAGGCGGCCACCCATATGGCGGACGGCTACGCTCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCG > 8:289140/1‑149 TGCATGTTTACGACGCACTGTTCAAAGAACCGGAAGTGGAACACATCCTGGTTCGTCACGAGCAGGCGGCCACCCATATGGCGGACGGCTACGCTCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCGC < 5:279497/145‑1 TGCATGTTTACGACGCACTGTTCAAAGAACCGGAAGTGGAACACATCCTGGTTCGTCACGAGCAGGCGGCCACCCATATGGCGGACGGCTACGCTCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCGC > 6:279497/1‑145 CGCTCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCGCGAGCGTAGCCGTCCGCCATATGGGTGGCCGCCTGCTCGTGACGAACCAGGATGTGTTCCACTTCCG < 1:272673/120‑1 CGCTCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCGCGAGCGTAGCCGTCCGCCATATGGGTGGCCGCCTGCTCGTGACGAACCAGGATGTGTTCCACTTCCG > 2:272673/1‑120 TCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCGCGAGCGTAGCCGTCCGCCATATGGGTGGCCGCCTGCTCGTGACGAACCAGGATGTGTTCCACTTCCGGTTCTTTGAACAGT > 3:214000/1‑131 TCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCGCGAGCGTAGCCGTCCGCCATATGGGTGGCCGCCTGCTCGTGACGAACCAGGATGTGTTCCACTTCCGGTTCTTTGAACAGT < 4:214000/131‑1 GCGAGCGTAGCCGTCCGCCATATGGGTGGCCGCCTGCTCGTGACGAACCAGGATGTGTTCCACTTCCGGTTCTTTGAACAGTGCGTCGTAAACATGCAGGAGAGCACCACCAGGGTACCCGTAGATGTGCTTAACGCCTTCGTCACGC > 6:122535/1‑148 GCGAGCGTAGCCGTCCGCCATATGGGTGGCCGCCTGCTCGTGACGAACCAGGATGTGTTCCACTTCCGGTTCTTTGAACAGTGCGTCGTAAACATGCAGGAGAGCACCACCAGGGTACCCGTAGATGT < 7:236254/128‑1 GCGAGCGTAGCCGTCCGCCATATGGGTGGCCGCCTGCTCGTGACGAACCAGGATGTGTTCCACTTCCGGTTCTTTGAACAGTGCGTCGTAAACATGCAGGAGAGCACCACCAGGGTACCCGTAGATGT > 8:236254/1‑128 GCTCTCCTGCATGTTTACGACGCACTGTTCAAAGAACCGGAAGTGGAACACATCCTGGTTCGTCACGAGCAGGCGGCCACCCATATGGCGGACGGCTACGCTCGCGCCACCGGCAAGGCCGGTGTGGTGCTGGTAACCTCCGGTCCTGGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5319289‑5319136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgaGCGTAGCCGTCCGCCATATGGGTGGCCGCCTGCTCGTGACGAACCAGGATGTGTTCCACTTCCGGTTCTTTGAACAGTGCGTCGTAAACATGCAGGAGAGCACCACCAGGGTACCCGTAGATGTGCTTAACGCCTTCGTCACGC > NC_002947/5319189‑5319332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |