New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 533976352 (0.980)4 (0.080) 4/246 NT 6.9% coding (991/1383 nt) pcnB poly(A) polymerase
?NC_002947 = 5339803 57 (1.110)coding (1031/1383 nt) pcnB poly(A) polymerase

GGCCGACCTACACCCACACGCTGATCAGCCAGGCACTGAACAACACCGACCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5339614‑5339763
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggTCGTGGGCCGCACCGTTCATGGCCGGGATCGGCGGCACGCCCTGGTTC  <  NC_002947/5339803‑5339756
                                                                                                                                                                                                      
GGCCGACCTACACCCACACGCTGATCAGCCAGGCACTGAACAACACCGACCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAG                                                   <  1:258113/149‑1
 GCCGACCTACACCCACACGCTGATCAGCCAGGCACTGAACAACACCGACCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAGG                                                  <  3:176131/149‑1
                          AGCCAGGCACTGAACAACACCGACCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAGGTCGTGGGCCGCACCGTTCATGGCCG                         >  4:199273/1‑149
                              AGGCACTGAACAACACCGACCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAGG                                                  <  5:111137/120‑1
                              AGGCACTGAACAACACCGACCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAGG                                                  >  6:111137/1‑120
                                    TGAACAACACCGACCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAGGTCGTGGGCCGCACCGTTCATGGCCGGGATCGGCGG               >  7:329128/1‑149
                                            ACCGACCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAGGTCGTGGGCCGCACCGTTCATGGCCGGGATCGGCGGCACGCCCT       <  3:199273/149‑1
                                                 CCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAGGTCGTGGGCCGCACCGTTCATGGCCGGGATCGGCGGCACGCCCTGGTTC  <  8:329128/149‑1
                                                                                                                                                                                                      
GGCCGACCTACACCCACACGCTGATCAGCCAGGCACTGAACAACACCGACCTGCGCGTGAAGCAGGGCAAGCCGGTGACGCCAGCCTTCCTGTTTGCTGCTCTGCTCTGGCCAGCCCTGCCGGCCCGTGTGCTGCACCTGCAGAACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5339614‑5339763
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggTCGTGGGCCGCACCGTTCATGGCCGGGATCGGCGGCACGCCCTGGTTC  <  NC_002947/5339803‑5339756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.