New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5341916 =	54 (1.020)	4 (0.080)	4/240	NT	6.9%	coding (226/864 nt)	panC	pantothenate synthetase
	?	NC_002947	5341952 =	57 (1.140)					coding (262/864 nt)	panC	pantothenate synthetase

AAATGCCCAGGCCGGCTGGCGCCGCACAGGCCTTCGGAAAGCTGGGGCACGCTGACGCGGGTTTGCACGCTCATGCCGTCGGGGTACATCTCTTCCACCGTGGGTGCGAACAGCAGGTTGCAGCCGGCCTGCACCAGGCGCTCCTGGTCGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5342070‑5341916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgcAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAGCCGGCCTGGGCATTTCGAGGGTGTGGCCACCGTGGTGAACAA  >  NC_002947/5341952‑5342097                                                                                                                                                                                                                                                                                                               AAATGCCCAGGCCGGCTGGCGCCGCACAGGCCTTCGGAAAGCTGGGGCACGCTGACGCGGGTTTGCACGCTCATGCCGTCGGGGTACATCTCTTCCACCGTGGGTGCGAACAGCAGGTTGCAGCCGGCCTGCACCAGGCGCTCCTGGTC                                                                                                                                                          <  1:155442/149‑1   ATGCCCAGGCCGGCTGGCGCCGCACAGGCCTTCGGAAAGCTGGGGCACGCTGACGCGGGTTTGCACGCTCATGCCGTCGGGGTACATCTCTTCCACCGTGGGTGCGAACAGCAGGTTGCAGCCGGCCTGCACCAGGCGCTCCTGGTCGG                                                                                                                                                        <  4:137520/149‑1                                                                                                                         CAGCCGGCCTGCACCAGGCGCTCCTGGTCGGCTGCAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAG                                            >  1:88243/1‑139                                                                                                                         CAGCCGGCCTGCACCAGGCGCTCCTGGTCGGCTGCAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAG                                            <  2:88243/139‑1                                                                                                                          AGCCGGCCTGCACCAGGCGCTCCTGGTCGGCTGCAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGC                                                 <  7:98197/133‑1                                                                                                                          AGCCGGCCTGCACCAGGCGCTCCTGGTCGGCTGCAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGC                                                 >  8:98197/1‑133                                                                                                                                                      GGCTGCAACCTGCTGTTCGCACCCATGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAGCCGGCCTGGGCATTTCGAGGGTGTGGCCACCGTGGTGAA     <  5:57291/149‑1                                                                                                                                                      GGCTGCAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAGCCGGCCTGGGCATTTCGAGGGTGTGGCCACCGTGGTGAA     <  2:155442/149‑1                                                                                                                                                        CTGCAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAGCCGGCCTGGGCATTTCGAGGGTGTG                   >  1:273354/1‑133                                                                                                                                                        CTGCAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAGCCGGCCTGGGCATTTCGAGGGTGTG                   <  2:273354/133‑1                                                                                                                                                         TGCAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAGCCGGCCTGGGCATTTCGAGGGTGTGGCCACCGTGGT        >  7:129843/1‑143                                                                                                                                                         TGCAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAGCCGGCCTGGGCATTTCGAGGGTGTGGCCACCGTGGT        <  8:129843/143‑1                                                                                                                                                           CAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAGCCGGCCTGGGCATTTCGAGGGTGTGGCCACCGTGGTGAACAA  <  1:49316/147‑1                                                                                                                                                                                                                                                                                                               AAATGCCCAGGCCGGCTGGCGCCGCACAGGCCTTCGGAAAGCTGGGGCACGCTGACGCGGGTTTGCACGCTCATGCCGTCGGGGTACATCTCTTCCACCGTGGGTGCGAACAGCAGGTTGCAGCCGGCCTGCACCAGGCGCTCCTGGTCGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5342070‑5341916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgcAACCTGCTGTTCGCACCCACGGTGGAAGAGATGTACCCCGACGGCATGAGCGTGCAAACCCGCGTCAGCGTGCCCCAGCTTTCCGAAGGCCTGTGCGGCGCCAGCCGGCCTGGGCATTTCGAGGGTGTGGCCACCGTGGTGAACAA  >  NC_002947/5341952‑5342097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.