| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5374108 = | 52 (0.980) | 3 (0.060) | 3/240 | NT | 5.7% | coding (192/804 nt) | dapB | 4‑hydroxy‑tetrahydrodipicolinate reductase |
| ? | NC_002947 | 5374150 = | 50 (1.000) | coding (150/804 nt) | dapB | 4‑hydroxy‑tetrahydrodipicolinate reductase | |||||
GGCAAAACCCTCATCGAAGCCGTGCAACAAACCCCGGGCGCGGGGCTGACTGCGGCGATCGATCGCCCTGACAGCTCGTTGGTCGGGGCTGATGCCGGAGAGCTGGCGGCACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTGGCCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5374260‑5374108‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaagTGCCGCCAGCTCTCCGGCATCAGCCCCGACCAACGAGCTGTCAGGGCGATCGATCGCCGCAGTCAGCCCCGCGCCCGGGGTTTGTTGCACGGCTTCGATGAGGGTTTTGCCCATCCGCCCCGCCGCGCCCATCACTGCAATACGT > NC_002947/5374150‑5374294 GGCAAAACCCTCATCGAAGCCGTGCAACAAACCCCGGGCGCGGGGCTGACTGCGGCGATCGATCGCCCTGACAGCTCGTTGGTCGGGGCTGATGCCGGAGAGCTGGCGGCACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTGGC < 2:308248/149‑1GGCAAAACCCTCATCGAAGCCGTGCAACAAACCCCGGGCGCGGGGCTGACTGCGGCGATCGATCGCCCTGACAGCTCGTTGGTCGGGGCTGATGCCGGAGAGCTGGCGGCACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTGGC < 8:309231/149‑1 GCAAAACCCTCATCGAAGCCGTGCAACAAACCACGGGCGCGGGGCTGACTGCGGCGATCGATCGCCCTGACAGCTAGTTGGTCGGGGCTGATGCCGGAGAGCTGGCGGCACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTGGC > 2:274637/1‑148 AAAACCCTCATCGAAGCCGTGCAACAAACCCCGGGCGCGGGGCTGACTGCGGCGATCGATCGCCCTGACAGCTCGTTGGTCGGGGCTGATGCCGGAGAGCTGGCGGCACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTGGCCAA < 1:249632/149‑1 CCTCATCGAAGCCGTGCAACAAACCCCGGGCGCGGGGCTGACTGCGGCGATCGATCGCCCTGACAGCTCGTTGGTCGGGGCTGATGCCGGAGAGCTGGCGGCACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTG > 7:253898/1‑139 CCTCATCGAAGCCGTGCAACAAACCCCGGGCGCGGGGCTGACTGCGGCGATCGATCGCCCTGACAGCTCGTTGGTCGGGGCTGATGCCGGAGAGCTGGCGGCACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTG < 8:253898/139‑1 GCACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTGGCCAAGTGCCGCCAGCTCTCCGGCATCAGCCCCGACCAACGAGCTGTCAGGGCGATCGATCGCCGCAGTCAGCCCCGCGCCCGGGGTTTGTTGCACGGCTTCGATGAGGG > 7:151759/1‑149 ACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTGGCCAAGTGCCGCCAGCTCTCCGGCATCAGCCCCGACCAACGAGCTGTCAGGGCGATCGATCGCCGCAGTCAGCCCCGCGCCCGGGGTTTGTTGCAC > 7:130396/1‑133 ACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTGGCCAAGTGCCGCCAGCTCTCCGGCATCAGCCCCGACCAACGAGCTGTCAGGGCGATCGATCGCCGCAGTCAGCCCCGCGCCCGGGGTTTGTTGCAC < 8:130396/133‑1 GGCCAAGTGCCGCCAGCTCTCCGGCATCAGCCCCGACCAACGAGCTGTCAGGGCGATCGATCGCCGCAGTCAGCCCCGCGCCCGGGGTTTGTTGCACGGCTTCGATGAGGGTTTTGCCCATCCGCCCCGCCGCGCCCATCACTGCAAT < 4:73596/148‑1 CAAGTGCCGCCAGCTCTCCGGCATCAGCCCCGACCAACGAGCTGTCAGGGCGATCGATCGCCGCAGTCAGCCCCGCGCCCGGGGTTTGTTGCACGGCTTCGATGAGGGTTTTGCCCATCCGCCCCGCCGCGCCCATCACTGCAATACGT > 5:295380/1‑149 GGCAAAACCCTCATCGAAGCCGTGCAACAAACCCCGGGCGCGGGGCTGACTGCGGCGATCGATCGCCCTGACAGCTCGTTGGTCGGGGCTGATGCCGGAGAGCTGGCGGCACTTGGCCGAATTGGCGTGCTGTTGTCCGACGACCTGGCCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5374260‑5374108‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaagTGCCGCCAGCTCTCCGGCATCAGCCCCGACCAACGAGCTGTCAGGGCGATCGATCGCCGCAGTCAGCCCCGCGCCCGGGGTTTGTTGCACGGCTTCGATGAGGGTTTTGCCCATCCGCCCCGCCGCGCCCATCACTGCAATACGT > NC_002947/5374150‑5374294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |