| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5425659 = | 54 (1.020) | 3 (0.060) | 3/238 | NT | 5.9% | coding (195/1239 nt) | PP_4765 | hypothetical protein |
| ? | NC_002947 | 5425688 = | 45 (0.910) | coding (224/1239 nt) | PP_4765 | hypothetical protein | |||||
CGGCTTTCATGTCGGTGGGGAACACCCGGCCCGAGGTGCCGACGAAGGTTTCGATGCCCAAACCATGAATCCACTGGCGCAACGCGTCCGCATCGAAGTCGCGTAGCAGGGCCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5425813‑5425659‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaacgccAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGCTGCGTGCCTGGCT > NC_002947/5425688‑5425835 CGGCTTTCATGTCGGTGGGGAACACCCGGCCCGAGGTGCCGACGAAGGTTTCGATGCCCAAACCATGAATCCACTGGCGCAACGCGTCCGCATCGAAGTCGCGTAGCAGGGCCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCAC < 7:302064/148‑1CGGCTTTCATGTCGGTGGGGAACACCCGGCCCGAGGTGCCGACGAAGGTTTCGATGCCCAAACCATGAATCCACTGGCGCAACGCGTCCGCATCGAAGTCGCGTAGCAGGGCCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCAC < 7:57806/148‑1 TTTCATGTCGGTGGGGAACACCCGGCCCGAGGTGCCGACGAAGGTTTCGATGCCCAAACCATGAATCCACTGGCGCAACGCGTCCGCATCGAAGTCGCGTAGCAGGGCCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACG > 1:172193/1‑149 TTTCATGTCGGTGGGGAACACCCGGCCCGAGGTGCCGACGAAGGTTTCGATGCCCAAACCATGAATCCACTGGCGCAACGCGTCCGCATCGAAGTCGCGTAGCAGGGCCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACG > 4:279400/1‑149 TCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACGCCAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTC > 6:3794/1‑149 TTGGCGTTCGGCATAGCGTGCCACGAACGCCAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCG > 7:20224/1‑106 TTGGCGTTCGGCATAGCGTGCCACGAACGCCAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCG < 8:20224/106‑1 CCACGAACGCCAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGCTGC < 5:3794/149‑1 GAACGCCAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGCTGCGTGC > 7:16131/1‑149 AACGCCAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGCTGCGTGCC < 8:187049/149‑1 ACGCCAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGCTGCGTGCCT < 8:16131/149‑1 CAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGCTGCGTGCCTGGCT > 6:5585/1‑149 CGGCTTTCATGTCGGTGGGGAACACCCGGCCCGAGGTGCCGACGAAGGTTTCGATGCCCAAACCATGAATCCACTGGCGCAACGCGTCCGCATCGAAGTCGCGTAGCAGGGCCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5425813‑5425659‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaacgccAAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGCTGCGTGCCTGGCT > NC_002947/5425688‑5425835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |