New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5510365	43 (0.810)	3 (0.060)	3/238	NT	6.1%	coding (564/1488 nt)	urtB	urea ABC transporter permease
	?	NC_002947	= 5510401	52 (1.050)					coding (600/1488 nt)	urtB	urea ABC transporter permease

CTGGGCGCCAGCGAGCCTGCGGTACGCCTGGCCGCCGTGCGCCTGCTGGGTGAAACCGGCGACCCGCTGGCCCGCACCCGCCTCGAAGCCCTGCTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5510213‑5510365 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggccGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGGGCCAGGCTCGTTTCGGCGGCTGTGCGCACGCCCGGGTCTAGTTCTGCATCGGGCTGCAGCAGGGCTTCGAGGCGGGTGCGGGCCAGCGGGTCGCCGGTTTCACCCAGCAGG  <  NC_002947/5510401‑5510254                                                                                                                                                                                                                                                                                                               CTGGGCGCCAGCGAGCCTGCGGTACGCCTGGCCGCCGTGCGCCTGCTGGGTGAAACCGGCGACCCGCTGGCCCGCACCCGCCTCGAAGCCCTGCTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCT                                                                                                                                                          >  3:226193/1‑149    GGCGCCAGCGAGCCTGCGGTACGCCTGGCCGCCGTGCGCCTGCTGGGTGAAACCGGCGACCCGCTGGCCCGCACCCGCCTCGAAGCCCTGCTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGC                                                                                                                                                       >  2:84929/1‑149     GCGCCAGCGAGCCTGCGGTACGCCTGGCCGCCGTGCGCCTGCTGGGTGAAACCGGCGACCCGCTGGCCCGCACCCGCCTCGAAGCCCTGCTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCC                                                                                                                                                      <  4:226193/149‑1       GCCAGCGAGCCTGCGGTACGCCTGGCCGCCGTGCGCCTGCTGGGTGAAACCGGCGACCCGCTGGCCCGCACCCGCCTCGAAGCCCTGCTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCC                                                                                                                                                      >  5:232535/1‑147                          GCCTGGCCGCCGTGCGCCTGCTGGGTGAAACCGGCGACCCGCTGGCCCGCACCCGCCTCGAAGCCCTGCTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCC                                                                                                                                                           >  3:338938/1‑123                          GCCTGGCCGCCGTGCGCCTGCTGGGTGAAACCGGCGACCCGCTGGCCCGCACCCGCCTCGAAGCCCTGCTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCC                                                                                                                                                           <  4:338938/123‑1                                                   tgcAACCGGCGACCAGCGGGCCCGCACCCTCCTCGATGCCCTGCTGCAGCCCGATGCAGCACTAGTCCCGGGCGTGCGCACAGCCGCCGAATCGAGGCTGGCCGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGGGCCATGCTC                                                                                                        <  4:32046/146‑1                                                                                                            AGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGG                                                                                                                 <  3:51133/83‑1                                                                                                            AGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGG                                                                                                                 >  4:51133/1‑83                                                                                                                                                  GCCTGGCCGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGGGCCAGGCTCGTTTCGGCGGCTGTGCGCACGCCCGGGTCTAGTTCTGCATCGGGCTGCAGCAGGGCTTCGAGGCGGGTGCGGGCCAGCGGGTCGCCGGTTTCACC         <  5:66346/149‑1                                                                                                                                                    CTGGCCGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGGGCCAGGCTCGTTTCGGCGGCTGTGCGCACGCCCGGGTCTAGTTCTGCATCGGGCTGCAGCAGGGCTTCGAGGCGGGTGCGGGCCAGCGGGTCGCCGGTTTCACC         >  4:212411/1‑147                                                                                                                                                    CTGGCCGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGGGCCAGGCTCGTTTCGGCGGCTGTGCGCACGCCCGGGTCTAGTTCTGCATCGGGCTGCAGCAG                                                   <  6:156508/105‑1                                                                                                                                                       GCCGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGGGCCAGGCTCGTTTCGGCGGCTGTGCGCACGCCCGGGTCTAGTTCTGCATCGGGCTGCAGCAGGGCTTCGAGGCGGGTGCGGGCCAGCGGGTCGCCGGTTTCACCCAGCA    <  3:212411/149‑1                                                                                                                                                        CCGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGGGCCAGGCTCGTTTCGGCGGCTGTGCGCACGCCCGGGTCTAGTTCTGCATCGGGCTGCAGCAGGGCTTCGAGGCGGGTGCGGGCCAGCGGGTCGCCGGTTTCACCCAGCAG   <  1:128978/149‑1                                                                                                                                                         CGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGGGCCAGGCTCGTTTCGGCGGCTGTGCGCACGCCCGGGTCTAGTTCTGCATCGGGCTGCAGCAGGGCTTCGAGGCGGGTGCGGGCCAGCGGGTCGCCGGTTTCACCCAGCAGG  >  8:251795/1‑149                                                                                                                                                                                                                                                                                                               CTGGGCGCCAGCGAGCCTGCGGTACGCCTGGCCGCCGTGCGCCTGCTGGGTGAAACCGGCGACCCGCTGGCCCGCACCCGCCTCGAAGCCCTGCTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5510213‑5510365 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggccGAGCAGTTCGCCTAGCAGCAGTTTGCGCTTGACCTGGGCCAGGCTCGTTTCGGCGGCTGTGCGCACGCCCGGGTCTAGTTCTGCATCGGGCTGCAGCAGGGCTTCGAGGCGGGTGCGGGCCAGCGGGTCGCCGGTTTCACCCAGCAGG  <  NC_002947/5510401‑5510254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.